Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Irf8P23611 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf8P23611 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Irf8P23611 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Irf8P23611 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf8P23611 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf8P23611 Gm18671-201ENSMUST00000214826 683 ntBASIC20.51■□□□□ 0.87
Irf8P23611 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf8P23611 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf8P23611 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf8P23611 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Irf8P23611 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf8P23611 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.5■□□□□ 0.87
Irf8P23611 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Irf8P23611 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.5■□□□□ 0.87
Irf8P23611 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.5■□□□□ 0.87
Irf8P23611 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Irf8P23611 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Irf8P23611 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf8P23611 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Irf8P23611 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
Irf8P23611 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf8P23611 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.48■□□□□ 0.87
Irf8P23611 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Irf8P23611 Gm10849-201ENSMUST00000100397 618 ntBASIC20.48■□□□□ 0.87
Irf8P23611 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Irf8P23611 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf8P23611 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.47■□□□□ 0.87
Irf8P23611 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.47■□□□□ 0.87
Irf8P23611 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf8P23611 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Irf8P23611 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.46■□□□□ 0.87
Irf8P23611 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Irf8P23611 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 AV356131-201ENSMUST00000206201 750 ntBASIC20.45■□□□□ 0.86
Irf8P23611 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Irf8P23611 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf8P23611 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf8P23611 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.44■□□□□ 0.86
Irf8P23611 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Irf8P23611 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.44■□□□□ 0.86
Irf8P23611 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms