Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CD48P09326 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CD48P09326 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.3■■□□□ 1.16
CD48P09326 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.3■■□□□ 1.16
CD48P09326 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CD48P09326 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CD48P09326 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CD48P09326 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CD48P09326 AC099791.1-201ENST00000416440 715 ntBASIC22.29■■□□□ 1.16
CD48P09326 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.29■■□□□ 1.16
CD48P09326 AP001330.3-201ENST00000520123 633 ntBASIC22.29■■□□□ 1.16
CD48P09326 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CD48P09326 AC126544.1-201ENST00000580842 1059 ntBASIC22.29■■□□□ 1.16
CD48P09326 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.29■■□□□ 1.16
CD48P09326 AC026310.3-201ENST00000625186 2373 ntBASIC22.29■■□□□ 1.16
CD48P09326 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CD48P09326 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CD48P09326 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CD48P09326 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.28■■□□□ 1.16
CD48P09326 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CD48P09326 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
CD48P09326 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CD48P09326 AL031432.3-201ENST00000607698 485 ntBASIC22.28■■□□□ 1.16
CD48P09326 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CD48P09326 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CD48P09326 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CD48P09326 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CD48P09326 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.27■■□□□ 1.16
CD48P09326 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CD48P09326 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CD48P09326 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CD48P09326 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.27■■□□□ 1.16
CD48P09326 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CD48P09326 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.27■■□□□ 1.16
CD48P09326 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CD48P09326 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CD48P09326 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.26■■□□□ 1.15
CD48P09326 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CD48P09326 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.26■■□□□ 1.15
CD48P09326 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.26■■□□□ 1.15
CD48P09326 AP004607.7-201ENST00000527152 1677 ntBASIC22.26■■□□□ 1.15
CD48P09326 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.26■■□□□ 1.15
CD48P09326 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD48P09326 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 EDA-201ENST00000338901 1233 ntBASIC22.25■■□□□ 1.15
CD48P09326 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CD48P09326 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 IGHV3-19-201ENST00000521488 291 ntBASIC22.25■■□□□ 1.15
CD48P09326 SMUG1P1-201ENST00000590640 811 ntBASIC22.25■■□□□ 1.15
CD48P09326 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CD48P09326 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CD48P09326 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD48P09326 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CD48P09326 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.25■■□□□ 1.15
CD48P09326 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.25■■□□□ 1.15
CD48P09326 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.24■■□□□ 1.15
CD48P09326 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.24■■□□□ 1.15
CD48P09326 AC244015.2-201ENST00000616358 1861 ntBASIC22.24■■□□□ 1.15
CD48P09326 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CD48P09326 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.24■■□□□ 1.15
CD48P09326 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CD48P09326 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.24■■□□□ 1.15
CD48P09326 AF213884.3-201ENST00000563833 479 ntBASIC22.24■■□□□ 1.15
CD48P09326 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.24■■□□□ 1.15
CD48P09326 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CD48P09326 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD48P09326 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.23■■□□□ 1.15
CD48P09326 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD48P09326 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.23■■□□□ 1.15
CD48P09326 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CD48P09326 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CD48P09326 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.23■■□□□ 1.15
CD48P09326 MIR939-201ENST00000401314 82 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms