Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN1P07384 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN1P07384 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN1P07384 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN1P07384 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN1P07384 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN1P07384 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CAPN1P07384 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN1P07384 SLC47A1P1-202ENST00000449666 945 ntBASIC21.07■□□□□ 0.96
CAPN1P07384 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN1P07384 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN1P07384 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN1P07384 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CAPN1P07384 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CAPN1P07384 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.06■□□□□ 0.96
CAPN1P07384 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.06■□□□□ 0.96
CAPN1P07384 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.06■□□□□ 0.96
CAPN1P07384 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.06■□□□□ 0.96
CAPN1P07384 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN1P07384 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CAPN1P07384 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CAPN1P07384 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.05■□□□□ 0.96
CAPN1P07384 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CAPN1P07384 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.05■□□□□ 0.96
CAPN1P07384 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.05■□□□□ 0.96
CAPN1P07384 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.05■□□□□ 0.96
CAPN1P07384 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CAPN1P07384 AC087623.3-201ENST00000607047 1098 ntBASIC21.05■□□□□ 0.96
CAPN1P07384 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CAPN1P07384 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CAPN1P07384 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CAPN1P07384 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.04■□□□□ 0.96
CAPN1P07384 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CAPN1P07384 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.04■□□□□ 0.96
CAPN1P07384 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.04■□□□□ 0.96
CAPN1P07384 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CAPN1P07384 AC010542.4-201ENST00000563151 1910 ntBASIC21.04■□□□□ 0.96
CAPN1P07384 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CAPN1P07384 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CAPN1P07384 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.04■□□□□ 0.96
CAPN1P07384 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
CAPN1P07384 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CAPN1P07384 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.03■□□□□ 0.96
CAPN1P07384 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CAPN1P07384 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CAPN1P07384 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.02■□□□□ 0.96
CAPN1P07384 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN1P07384 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN1P07384 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.02■□□□□ 0.96
CAPN1P07384 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.02■□□□□ 0.96
CAPN1P07384 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.02■□□□□ 0.96
CAPN1P07384 AC126544.1-201ENST00000580842 1059 ntBASIC21.02■□□□□ 0.96
CAPN1P07384 AL031602.1-201ENST00000633169 911 ntBASIC21.02■□□□□ 0.96
CAPN1P07384 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CAPN1P07384 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CAPN1P07384 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN1P07384 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.01■□□□□ 0.95
CAPN1P07384 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN1P07384 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPN1P07384 AC092666.2-201ENST00000613287 246 ntBASIC21.01■□□□□ 0.95
CAPN1P07384 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPN1P07384 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CAPN1P07384 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPN1P07384 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPN1P07384 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CAPN1P07384 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms