Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Serp2-204ENSMUST00000228055 705 ntBASIC13.36□□□□□ -0.27
Sh2d1aO88890 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.36□□□□□ -0.27
Sh2d1aO88890 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Golph3-205ENSMUST00000228671 2842 ntBASIC13.36□□□□□ -0.27
Sh2d1aO88890 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh2d1aO88890 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.35□□□□□ -0.27
Sh2d1aO88890 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.35□□□□□ -0.27
Sh2d1aO88890 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh2d1aO88890 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.34□□□□□ -0.27
Sh2d1aO88890 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Gm27454-201ENSMUST00000185090 204 ntBASIC13.34□□□□□ -0.27
Sh2d1aO88890 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.34□□□□□ -0.27
Sh2d1aO88890 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.34□□□□□ -0.27
Sh2d1aO88890 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1aO88890 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.34□□□□□ -0.27
Sh2d1aO88890 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh2d1aO88890 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh2d1aO88890 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh2d1aO88890 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
Sh2d1aO88890 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Gm12821-201ENSMUST00000120022 600 ntBASIC13.33□□□□□ -0.28
Sh2d1aO88890 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.33□□□□□ -0.28
Sh2d1aO88890 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1aO88890 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms