Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH16O75309 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH16O75309 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CDH16O75309 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH16O75309 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH16O75309 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH16O75309 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CDH16O75309 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH16O75309 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.66■■□□□ 1.06
CDH16O75309 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH16O75309 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH16O75309 AL499627.2-201ENST00000606283 725 ntBASIC21.66■■□□□ 1.06
CDH16O75309 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH16O75309 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH16O75309 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH16O75309 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDH16O75309 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH16O75309 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH16O75309 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
CDH16O75309 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH16O75309 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CDH16O75309 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDH16O75309 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH16O75309 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH16O75309 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDH16O75309 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH16O75309 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.64■■□□□ 1.06
CDH16O75309 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH16O75309 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDH16O75309 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDH16O75309 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.64■■□□□ 1.05
CDH16O75309 AC079089.2-201ENST00000531211 1277 ntBASIC21.64■■□□□ 1.05
CDH16O75309 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH16O75309 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH16O75309 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH16O75309 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH16O75309 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH16O75309 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH16O75309 KRT8P33-201ENST00000508125 1423 ntBASIC21.63■■□□□ 1.05
CDH16O75309 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH16O75309 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH16O75309 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH16O75309 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH16O75309 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDH16O75309 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH16O75309 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDH16O75309 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH16O75309 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH16O75309 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH16O75309 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.62■■□□□ 1.05
CDH16O75309 OXCT2P1-201ENST00000447263 1535 ntBASIC21.62■■□□□ 1.05
CDH16O75309 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH16O75309 AL031848.2-201ENST00000607670 837 ntBASIC21.62■■□□□ 1.05
CDH16O75309 AL031602.1-201ENST00000633169 911 ntBASIC21.62■■□□□ 1.05
CDH16O75309 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH16O75309 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH16O75309 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CDH16O75309 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH16O75309 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.62■■□□□ 1.05
CDH16O75309 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.62■■□□□ 1.05
CDH16O75309 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH16O75309 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH16O75309 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CDH16O75309 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH16O75309 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDH16O75309 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH16O75309 AL121603.2-201ENST00000557373 2117 ntBASIC21.61■■□□□ 1.05
CDH16O75309 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH16O75309 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.61■■□□□ 1.05
CDH16O75309 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH16O75309 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH16O75309 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH16O75309 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH16O75309 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH16O75309 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH16O75309 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.6■■□□□ 1.05
CDH16O75309 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDH16O75309 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH16O75309 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH16O75309 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH16O75309 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CDH16O75309 BX664725.1-201ENST00000438252 379 ntBASIC21.6■■□□□ 1.05
CDH16O75309 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms