Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CUBNO60494 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CUBNO60494 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CUBNO60494 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CUBNO60494 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CUBNO60494 AC009237.3-201ENST00000393279 1427 ntBASIC17.34■□□□□ 0.37
CUBNO60494 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CUBNO60494 MIR1224-201ENST00000408193 85 ntBASIC17.34■□□□□ 0.37
CUBNO60494 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.34■□□□□ 0.37
CUBNO60494 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CUBNO60494 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.33■□□□□ 0.37
CUBNO60494 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.33■□□□□ 0.37
CUBNO60494 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CUBNO60494 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.33■□□□□ 0.37
CUBNO60494 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CUBNO60494 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CUBNO60494 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.33■□□□□ 0.37
CUBNO60494 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.33■□□□□ 0.37
CUBNO60494 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CUBNO60494 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.33■□□□□ 0.36
CUBNO60494 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.33■□□□□ 0.36
CUBNO60494 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CUBNO60494 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CUBNO60494 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.32■□□□□ 0.36
CUBNO60494 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.32■□□□□ 0.36
CUBNO60494 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.32■□□□□ 0.36
CUBNO60494 AC026366.1-201ENST00000488803 879 ntBASIC17.32■□□□□ 0.36
CUBNO60494 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.32■□□□□ 0.36
CUBNO60494 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CUBNO60494 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.32■□□□□ 0.36
CUBNO60494 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.32■□□□□ 0.36
CUBNO60494 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CUBNO60494 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUBNO60494 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.32■□□□□ 0.36
CUBNO60494 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CUBNO60494 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 AC142381.4-202ENST00000563973 229 ntBASIC17.31■□□□□ 0.36
CUBNO60494 AP001160.3-201ENST00000601484 763 ntBASIC17.31■□□□□ 0.36
CUBNO60494 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CUBNO60494 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.31■□□□□ 0.36
CUBNO60494 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.31■□□□□ 0.36
CUBNO60494 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CUBNO60494 ESRRAP1-201ENST00000400596 1257 ntBASIC17.31■□□□□ 0.36
CUBNO60494 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 AC091874.3-201ENST00000512672 1195 ntBASIC17.31■□□□□ 0.36
CUBNO60494 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 AC073912.3-201ENST00000624414 853 ntBASIC17.31■□□□□ 0.36
CUBNO60494 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUBNO60494 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
CUBNO60494 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CUBNO60494 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CUBNO60494 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.3■□□□□ 0.36
CUBNO60494 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.3■□□□□ 0.36
CUBNO60494 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.3■□□□□ 0.36
CUBNO60494 AC013268.1-206ENST00000638368 961 ntBASIC17.3■□□□□ 0.36
CUBNO60494 AC112229.1-201ENST00000639295 961 ntBASIC17.3■□□□□ 0.36
CUBNO60494 OXCT2P1-201ENST00000447263 1535 ntBASIC17.3■□□□□ 0.36
CUBNO60494 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CUBNO60494 AC010141.3-201ENST00000456659 717 ntBASIC17.3■□□□□ 0.36
CUBNO60494 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
CUBNO60494 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.3■□□□□ 0.36
CUBNO60494 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUBNO60494 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
CUBNO60494 UNC93B5-201ENST00000530315 699 ntBASIC17.29■□□□□ 0.36
CUBNO60494 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUBNO60494 AC055733.4-201ENST00000638462 1354 ntBASIC17.29■□□□□ 0.36
CUBNO60494 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.29■□□□□ 0.36
CUBNO60494 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.29■□□□□ 0.36
CUBNO60494 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.29■□□□□ 0.36
CUBNO60494 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms