Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.5■□□□□ 0.23
NDUFA4O00483 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.5■□□□□ 0.23
NDUFA4O00483 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.5■□□□□ 0.23
NDUFA4O00483 SMUG1P1-201ENST00000590640 811 ntBASIC16.5■□□□□ 0.23
NDUFA4O00483 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NDUFA4O00483 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
NDUFA4O00483 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NDUFA4O00483 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.49■□□□□ 0.23
NDUFA4O00483 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NDUFA4O00483 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.49■□□□□ 0.23
NDUFA4O00483 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFA4O00483 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.49■□□□□ 0.23
NDUFA4O00483 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NDUFA4O00483 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFA4O00483 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.49■□□□□ 0.23
NDUFA4O00483 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFA4O00483 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
NDUFA4O00483 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.48■□□□□ 0.23
NDUFA4O00483 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NDUFA4O00483 MIR572-201ENST00000384983 95 ntBASIC16.48■□□□□ 0.23
NDUFA4O00483 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFA4O00483 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFA4O00483 AC005837.3-201ENST00000612163 286 ntBASIC16.48■□□□□ 0.23
NDUFA4O00483 AC105233.4-201ENST00000642045 216 ntBASIC16.48■□□□□ 0.23
NDUFA4O00483 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFA4O00483 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NDUFA4O00483 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.47■□□□□ 0.23
NDUFA4O00483 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
NDUFA4O00483 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFA4O00483 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFA4O00483 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.46■□□□□ 0.23
NDUFA4O00483 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NDUFA4O00483 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NDUFA4O00483 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.46■□□□□ 0.23
NDUFA4O00483 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.46■□□□□ 0.23
NDUFA4O00483 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.46■□□□□ 0.23
NDUFA4O00483 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.46■□□□□ 0.23
NDUFA4O00483 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFA4O00483 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.46■□□□□ 0.22
NDUFA4O00483 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NDUFA4O00483 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NDUFA4O00483 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFA4O00483 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NDUFA4O00483 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.45■□□□□ 0.22
NDUFA4O00483 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFA4O00483 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFA4O00483 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFA4O00483 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFA4O00483 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms