Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
EIF3FO00303 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3FO00303 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.05■□□□□ 0.96
EIF3FO00303 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.05■□□□□ 0.96
EIF3FO00303 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.05■□□□□ 0.96
EIF3FO00303 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3FO00303 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3FO00303 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3FO00303 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3FO00303 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3FO00303 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3FO00303 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EIF3FO00303 MIR572-201ENST00000384983 95 ntBASIC21.04■□□□□ 0.96
EIF3FO00303 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
EIF3FO00303 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.04■□□□□ 0.96
EIF3FO00303 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3FO00303 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
EIF3FO00303 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3FO00303 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3FO00303 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3FO00303 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
EIF3FO00303 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.03■□□□□ 0.96
EIF3FO00303 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.03■□□□□ 0.96
EIF3FO00303 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.03■□□□□ 0.96
EIF3FO00303 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
EIF3FO00303 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.03■□□□□ 0.96
EIF3FO00303 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
EIF3FO00303 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
EIF3FO00303 AC010542.4-201ENST00000563151 1910 ntBASIC21.03■□□□□ 0.96
EIF3FO00303 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.03■□□□□ 0.96
EIF3FO00303 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
EIF3FO00303 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3FO00303 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
EIF3FO00303 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
EIF3FO00303 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3FO00303 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3FO00303 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3FO00303 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
EIF3FO00303 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.02■□□□□ 0.96
EIF3FO00303 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3FO00303 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.02■□□□□ 0.96
EIF3FO00303 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3FO00303 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.02■□□□□ 0.96
EIF3FO00303 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.02■□□□□ 0.96
EIF3FO00303 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.02■□□□□ 0.96
EIF3FO00303 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
EIF3FO00303 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
EIF3FO00303 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
EIF3FO00303 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
EIF3FO00303 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.01■□□□□ 0.95
EIF3FO00303 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 AC105233.4-201ENST00000642045 216 ntBASIC21.01■□□□□ 0.95
EIF3FO00303 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
EIF3FO00303 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.01■□□□□ 0.95
EIF3FO00303 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3FO00303 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.01■□□□□ 0.95
EIF3FO00303 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3FO00303 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
EIF3FO00303 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21■□□□□ 0.95
EIF3FO00303 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21■□□□□ 0.95
EIF3FO00303 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3FO00303 AC142381.2-201ENST00000566120 298 ntBASIC21■□□□□ 0.95
EIF3FO00303 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
EIF3FO00303 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 AC009237.3-201ENST00000393279 1427 ntBASIC20.99■□□□□ 0.95
EIF3FO00303 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.99■□□□□ 0.95
EIF3FO00303 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.99■□□□□ 0.95
EIF3FO00303 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
EIF3FO00303 AC104564.3-201ENST00000582367 638 ntBASIC20.99■□□□□ 0.95
EIF3FO00303 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EIF3FO00303 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms