Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
APBB1O00213 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
APBB1O00213 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
APBB1O00213 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
APBB1O00213 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
APBB1O00213 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
APBB1O00213 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.74■■□□□ 1.87
APBB1O00213 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.74■■□□□ 1.87
APBB1O00213 SMUG1P1-201ENST00000590640 811 ntBASIC26.74■■□□□ 1.87
APBB1O00213 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
APBB1O00213 AC026471.6-201ENST00000622954 1905 ntBASIC26.74■■□□□ 1.87
APBB1O00213 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
APBB1O00213 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.73■■□□□ 1.87
APBB1O00213 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.73■■□□□ 1.87
APBB1O00213 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APBB1O00213 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
APBB1O00213 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
APBB1O00213 AC105233.4-201ENST00000642045 216 ntBASIC26.73■■□□□ 1.87
APBB1O00213 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
APBB1O00213 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APBB1O00213 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
APBB1O00213 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.72■■□□□ 1.87
APBB1O00213 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 FAM99A-202ENST00000538190 1989 ntBASIC26.72■■□□□ 1.87
APBB1O00213 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.72■■□□□ 1.87
APBB1O00213 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.72■■□□□ 1.87
APBB1O00213 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
APBB1O00213 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.72■■□□□ 1.87
APBB1O00213 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
APBB1O00213 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.72■■□□□ 1.87
APBB1O00213 FBXW4P1-201ENST00000426721 2239 ntBASIC26.71■■□□□ 1.87
APBB1O00213 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.71■■□□□ 1.87
APBB1O00213 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.71■■□□□ 1.87
APBB1O00213 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
APBB1O00213 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.71■■□□□ 1.87
APBB1O00213 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 ZNRF2P3-201ENST00000424200 374 ntBASIC26.71■■□□□ 1.87
APBB1O00213 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.71■■□□□ 1.87
APBB1O00213 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
APBB1O00213 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.71■■□□□ 1.87
APBB1O00213 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
APBB1O00213 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
APBB1O00213 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.7■■□□□ 1.87
APBB1O00213 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.7■■□□□ 1.87
APBB1O00213 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
APBB1O00213 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
APBB1O00213 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.7■■□□□ 1.86
APBB1O00213 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.7■■□□□ 1.86
APBB1O00213 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
APBB1O00213 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
APBB1O00213 MIR6084-201ENST00000622012 110 ntBASIC26.7■■□□□ 1.86
APBB1O00213 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
APBB1O00213 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
APBB1O00213 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
APBB1O00213 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
APBB1O00213 AP004607.7-201ENST00000527152 1677 ntBASIC26.7■■□□□ 1.86
APBB1O00213 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.69■■□□□ 1.86
APBB1O00213 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
APBB1O00213 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
APBB1O00213 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.69■■□□□ 1.86
APBB1O00213 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
APBB1O00213 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
APBB1O00213 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.69■■□□□ 1.86
APBB1O00213 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
APBB1O00213 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
APBB1O00213 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
APBB1O00213 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
APBB1O00213 MIR572-201ENST00000384983 95 ntBASIC26.68■■□□□ 1.86
APBB1O00213 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.68■■□□□ 1.86
APBB1O00213 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.68■■□□□ 1.86
APBB1O00213 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
APBB1O00213 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.68■■□□□ 1.86
APBB1O00213 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
APBB1O00213 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.68■■□□□ 1.86
APBB1O00213 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
APBB1O00213 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.67■■□□□ 1.86
APBB1O00213 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
APBB1O00213 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
APBB1O00213 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
APBB1O00213 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms