Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.55■□□□□ 0.72
NPIPA3F8WFD2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPA3F8WFD2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.55■□□□□ 0.72
NPIPA3F8WFD2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPA3F8WFD2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPA3F8WFD2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 AC016769.1-201ENST00000409132 1010 ntBASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 AC137761.2-201ENST00000561729 223 ntBASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 AC145350.3-201ENST00000569033 163 ntBASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 KRT18P61-201ENST00000585825 1298 ntBASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 AC133561.1-201ENST00000568600 2415 ntBASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA3F8WFD2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 AC004854.2-201ENST00000608450 1441 ntBASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 AP004607.4-201ENST00000530158 1459 ntBASIC19.53■□□□□ 0.72
NPIPA3F8WFD2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA3F8WFD2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.52■□□□□ 0.71
NPIPA3F8WFD2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA3F8WFD2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 AC233723.2-201ENST00000623798 2106 ntBASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA3F8WFD2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 AC079140.4-201ENST00000507448 529 ntBASIC19.49■□□□□ 0.71
NPIPA3F8WFD2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms