Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPA2E9PIF3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 AC016769.1-201ENST00000409132 1010 ntBASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 AC137761.2-201ENST00000561729 223 ntBASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 AC145350.3-201ENST00000569033 163 ntBASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 KRT18P61-201ENST00000585825 1298 ntBASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 AC133561.1-201ENST00000568600 2415 ntBASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPA2E9PIF3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 AC004854.2-201ENST00000608450 1441 ntBASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 AP004607.4-201ENST00000530158 1459 ntBASIC19.53■□□□□ 0.72
NPIPA2E9PIF3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPA2E9PIF3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.52■□□□□ 0.71
NPIPA2E9PIF3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPA2E9PIF3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 AC233723.2-201ENST00000623798 2106 ntBASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPA2E9PIF3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NPIPA2E9PIF3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms