Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AL596275.1-201ENST00000423464 877 ntBASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 AC097658.1-201ENST00000475555 843 ntBASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 AC142381.4-202ENST00000563973 229 ntBASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 DUSP8P5-201ENST00000422884 1815 ntBASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SIT1Q9Y3P8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 BX276092.2-201ENST00000417668 665 ntBASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 AC007322.4-201ENST00000509611 723 ntBASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.83■■□□□ 1.09
SIT1Q9Y3P8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 AC093787.1-201ENST00000450396 207 ntBASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 AC083880.1-201ENST00000608266 535 ntBASIC21.82■■□□□ 1.08
SIT1Q9Y3P8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 AC138932.3-201ENST00000567634 1902 ntBASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 AC006058.3-201ENST00000606217 1069 ntBASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 AC016405.3-201ENST00000607710 860 ntBASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIT1Q9Y3P8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 LINC00543-201ENST00000567234 1845 ntBASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIT1Q9Y3P8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.79■■□□□ 1.08
SIT1Q9Y3P8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 AC128676.1-201ENST00000454392 318 ntBASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 MYC-209ENST00000641252 345 ntBASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 AC142381.3-201ENST00000568208 1670 ntBASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.78■■□□□ 1.08
SIT1Q9Y3P8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.77■■□□□ 1.08
SIT1Q9Y3P8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIT1Q9Y3P8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.77■■□□□ 1.08
SIT1Q9Y3P8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIT1Q9Y3P8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.77■■□□□ 1.08
SIT1Q9Y3P8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms