Protein–RNA interactions for Protein: Q9UBR1

UPB1, Beta-ureidopropionase, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1Q9UBR1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
UPB1Q9UBR1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPB1Q9UBR1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPB1Q9UBR1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPB1Q9UBR1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPB1Q9UBR1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 TSPY26P-201ENST00000476365 1326 ntBASIC19.34■□□□□ 0.69
UPB1Q9UBR1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.34■□□□□ 0.69
UPB1Q9UBR1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
UPB1Q9UBR1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPB1Q9UBR1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 IGHV3-19-201ENST00000521488 291 ntBASIC19.33■□□□□ 0.68
UPB1Q9UBR1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
UPB1Q9UBR1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 AL031602.1-201ENST00000633169 911 ntBASIC19.32■□□□□ 0.68
UPB1Q9UBR1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.32■□□□□ 0.68
UPB1Q9UBR1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 AC010141.3-201ENST00000456659 717 ntBASIC19.31■□□□□ 0.68
UPB1Q9UBR1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPB1Q9UBR1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPB1Q9UBR1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.29■□□□□ 0.68
UPB1Q9UBR1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UPB1Q9UBR1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPB1Q9UBR1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms