Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL138781.1-201ENST00000566567 1274 ntBASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 SMUG1P1-201ENST00000590640 811 ntBASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 AC079140.4-201ENST00000507448 529 ntBASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM7Q9NR12 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
PDLIM7Q9NR12 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.27■■□□□ 1.48
PDLIM7Q9NR12 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 AC093827.2-201ENST00000512654 315 ntBASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM7Q9NR12 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 AC010141.3-201ENST00000456659 717 ntBASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 AC231657.2-201ENST00000624556 255 ntBASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.25■■□□□ 1.47
PDLIM7Q9NR12 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 AC069152.1-201ENST00000438030 544 ntBASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 DUX4L16-201ENST00000555130 1264 ntBASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 AC005181.1-201ENST00000604782 1256 ntBASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PDLIM7Q9NR12 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 FAM201B-201ENST00000458407 597 ntBASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM7Q9NR12 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.22■■□□□ 1.47
PDLIM7Q9NR12 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 SLC29A4P1-201ENST00000398760 971 ntBASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 AC007322.1-201ENST00000426983 750 ntBASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 LINC01960-201ENST00000563759 1884 ntBASIC24.21■■□□□ 1.47
PDLIM7Q9NR12 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms