Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD1Q96S90 AC055733.4-201ENST00000638462 1354 ntBASIC21.49■■□□□ 1.03
LYSMD1Q96S90 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 AP006587.3-201ENST00000525742 1516 ntBASIC21.49■■□□□ 1.03
LYSMD1Q96S90 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD1Q96S90 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD1Q96S90 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD1Q96S90 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 CCDC92B-201ENST00000575506 885 ntBASIC21.46■■□□□ 1.03
LYSMD1Q96S90 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD1Q96S90 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LYSMD1Q96S90 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
LYSMD1Q96S90 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
LYSMD1Q96S90 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.45■■□□□ 1.02
LYSMD1Q96S90 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms