Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTHRC1Q96CG8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CTHRC1Q96CG8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.07■□□□□ 0.8
CTHRC1Q96CG8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTHRC1Q96CG8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CTHRC1Q96CG8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTHRC1Q96CG8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 IRS3P-201ENST00000223076 1006 ntBASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.05■□□□□ 0.8
CTHRC1Q96CG8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 AL354811.1-201ENST00000610286 706 ntBASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTHRC1Q96CG8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 AL358852.1-201ENST00000623174 1268 ntBASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 LINC00565-201ENST00000562710 2331 ntBASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTHRC1Q96CG8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 BX005040.4-201ENST00000637145 1518 ntBASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CTHRC1Q96CG8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
CTHRC1Q96CG8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTHRC1Q96CG8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 AC026471.6-201ENST00000622954 1905 ntBASIC20■□□□□ 0.79
CTHRC1Q96CG8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 ZNRF2P3-201ENST00000424200 374 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms