Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 AC009237.3-201ENST00000393279 1427 ntBASIC19.3■□□□□ 0.68
CPNE4Q96A23 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 AC026271.2-201ENST00000428091 497 ntBASIC19.29■□□□□ 0.68
CPNE4Q96A23 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CPNE4Q96A23 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 AC079834.2-201ENST00000609776 1949 ntBASIC19.29■□□□□ 0.68
CPNE4Q96A23 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE4Q96A23 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 AP004607.7-201ENST00000527152 1677 ntBASIC19.28■□□□□ 0.68
CPNE4Q96A23 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 TPRG1LP1-201ENST00000598702 760 ntBASIC19.28■□□□□ 0.68
CPNE4Q96A23 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE4Q96A23 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE4Q96A23 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPNE4Q96A23 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE4Q96A23 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE4Q96A23 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE4Q96A23 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE4Q96A23 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE4Q96A23 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE4Q96A23 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE4Q96A23 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE4Q96A23 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE4Q96A23 MIR5787-201ENST00000611784 55 ntBASIC19.27■□□□□ 0.68
CPNE4Q96A23 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE4Q96A23 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE4Q96A23 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.27■□□□□ 0.67
CPNE4Q96A23 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE4Q96A23 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE4Q96A23 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE4Q96A23 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE4Q96A23 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE4Q96A23 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE4Q96A23 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE4Q96A23 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE4Q96A23 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE4Q96A23 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE4Q96A23 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 AC233723.2-201ENST00000623798 2106 ntBASIC19.25■□□□□ 0.67
CPNE4Q96A23 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE4Q96A23 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE4Q96A23 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms