Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CLDN5-201ENST00000403084 2357 ntBASIC23.03■■□□□ 1.28
DDX1Q92499 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
DDX1Q92499 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX1Q92499 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.02■■□□□ 1.28
DDX1Q92499 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
DDX1Q92499 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX1Q92499 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX1Q92499 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX1Q92499 AP001330.3-201ENST00000520123 633 ntBASIC23.02■■□□□ 1.28
DDX1Q92499 AC087239.1-201ENST00000622671 572 ntBASIC23.02■■□□□ 1.28
DDX1Q92499 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX1Q92499 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
DDX1Q92499 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 FBXW4P1-201ENST00000426721 2239 ntBASIC23.01■■□□□ 1.27
DDX1Q92499 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 OR7E47P-201ENST00000546390 1422 ntBASIC23.01■■□□□ 1.27
DDX1Q92499 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX1Q92499 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX1Q92499 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX1Q92499 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX1Q92499 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
DDX1Q92499 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX1Q92499 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23■■□□□ 1.27
DDX1Q92499 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX1Q92499 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
DDX1Q92499 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23■■□□□ 1.27
DDX1Q92499 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX1Q92499 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX1Q92499 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX1Q92499 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX1Q92499 BID-212ENST00000614949 1988 ntTSL 5 BASIC23■■□□□ 1.27
DDX1Q92499 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX1Q92499 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX1Q92499 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX1Q92499 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX1Q92499 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX1Q92499 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX1Q92499 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX1Q92499 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
DDX1Q92499 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX1Q92499 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX1Q92499 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
DDX1Q92499 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX1Q92499 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.98■■□□□ 1.27
DDX1Q92499 AC233992.3-201ENST00000607491 485 ntBASIC22.98■■□□□ 1.27
DDX1Q92499 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX1Q92499 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX1Q92499 AC026471.6-201ENST00000622954 1905 ntBASIC22.98■■□□□ 1.27
DDX1Q92499 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX1Q92499 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX1Q92499 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX1Q92499 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.97■■□□□ 1.27
DDX1Q92499 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX1Q92499 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
DDX1Q92499 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX1Q92499 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX1Q92499 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.96■■□□□ 1.27
DDX1Q92499 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.96■■□□□ 1.27
DDX1Q92499 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.96■■□□□ 1.27
DDX1Q92499 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 RASA4CP-201ENST00000424092 1398 ntBASIC22.96■■□□□ 1.27
DDX1Q92499 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX1Q92499 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX1Q92499 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX1Q92499 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX1Q92499 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
DDX1Q92499 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.95■■□□□ 1.26
DDX1Q92499 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms