Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 AC005224.4-201ENST00000583262 1652 ntBASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 AC092053.2-201ENST00000640557 1818 ntBASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 ECEL1P1-201ENST00000373592 1742 ntBASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAM1L1Q8N609 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 TERF1P2-201ENST00000583350 1212 ntBASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.33■■□□□ 1.01
TRAM1L1Q8N609 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.33■■□□□ 1
TRAM1L1Q8N609 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRAM1L1Q8N609 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.33■■□□□ 1
TRAM1L1Q8N609 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRAM1L1Q8N609 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 CCDC92B-201ENST00000575506 885 ntBASIC21.32■■□□□ 1
TRAM1L1Q8N609 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 AC087623.3-201ENST00000607047 1098 ntBASIC21.32■■□□□ 1
TRAM1L1Q8N609 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAM1L1Q8N609 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.32■■□□□ 1
TRAM1L1Q8N609 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.31■■□□□ 1
TRAM1L1Q8N609 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.31■■□□□ 1
TRAM1L1Q8N609 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.31■■□□□ 1
TRAM1L1Q8N609 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.31■■□□□ 1
TRAM1L1Q8N609 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 AL117328.2-201ENST00000624617 1940 ntBASIC21.31■■□□□ 1
TRAM1L1Q8N609 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRAM1L1Q8N609 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.31■■□□□ 1
TRAM1L1Q8N609 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAM1L1Q8N609 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.3■■□□□ 1
TRAM1L1Q8N609 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.3■■□□□ 1
TRAM1L1Q8N609 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.3■■□□□ 1
TRAM1L1Q8N609 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.3■■□□□ 1
TRAM1L1Q8N609 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.3■■□□□ 1
TRAM1L1Q8N609 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAM1L1Q8N609 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.3■■□□□ 1
TRAM1L1Q8N609 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAM1L1Q8N609 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAM1L1Q8N609 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAM1L1Q8N609 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms