Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TwistnbQ78WZ7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TwistnbQ78WZ7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TwistnbQ78WZ7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TwistnbQ78WZ7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TwistnbQ78WZ7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Etf1-202ENSMUST00000180351 108 ntBASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TwistnbQ78WZ7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TwistnbQ78WZ7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TwistnbQ78WZ7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.35■□□□□ 0.69
TwistnbQ78WZ7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms