Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.87■□□□□ 0.45
Sox17Q61473 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sox17Q61473 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
Sox17Q61473 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sox17Q61473 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sox17Q61473 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.86■□□□□ 0.45
Sox17Q61473 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sox17Q61473 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox17Q61473 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.86■□□□□ 0.45
Sox17Q61473 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Sox17Q61473 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.85■□□□□ 0.45
Sox17Q61473 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.85■□□□□ 0.45
Sox17Q61473 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.85■□□□□ 0.45
Sox17Q61473 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Sox17Q61473 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sox17Q61473 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox17Q61473 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.84■□□□□ 0.45
Sox17Q61473 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.84■□□□□ 0.45
Sox17Q61473 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.84■□□□□ 0.45
Sox17Q61473 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox17Q61473 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sox17Q61473 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox17Q61473 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox17Q61473 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox17Q61473 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox17Q61473 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox17Q61473 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox17Q61473 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox17Q61473 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.83■□□□□ 0.44
Sox17Q61473 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sox17Q61473 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.82■□□□□ 0.44
Sox17Q61473 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sox17Q61473 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.82■□□□□ 0.44
Sox17Q61473 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.82■□□□□ 0.44
Sox17Q61473 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.82■□□□□ 0.44
Sox17Q61473 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox17Q61473 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox17Q61473 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox17Q61473 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox17Q61473 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.81■□□□□ 0.44
Sox17Q61473 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.81■□□□□ 0.44
Sox17Q61473 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox17Q61473 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.8■□□□□ 0.44
Sox17Q61473 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sox17Q61473 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.8■□□□□ 0.44
Sox17Q61473 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox17Q61473 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.8■□□□□ 0.44
Sox17Q61473 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms