Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 AC104187.1-201ENST00000607510 612 ntBASIC18.34■□□□□ 0.53
ARFGEF3Q5TH69 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.33■□□□□ 0.53
ARFGEF3Q5TH69 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ARFGEF3Q5TH69 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARFGEF3Q5TH69 AC087742.1-201ENST00000575880 1738 ntBASIC18.33■□□□□ 0.53
ARFGEF3Q5TH69 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.33■□□□□ 0.53
ARFGEF3Q5TH69 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 AL034346.1-201ENST00000568244 1277 ntBASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 DUSP8P5-201ENST00000422884 1815 ntBASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARFGEF3Q5TH69 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 CDCA4P2-201ENST00000441182 718 ntBASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 AP004607.7-201ENST00000527152 1677 ntBASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 AC079089.2-201ENST00000531211 1277 ntBASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.32■□□□□ 0.52
ARFGEF3Q5TH69 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 OR7E47P-201ENST00000546390 1422 ntBASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 KRT18P11-201ENST00000435214 1283 ntBASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 AC026185.1-201ENST00000445748 174 ntBASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARFGEF3Q5TH69 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 MFSD11-216ENST00000590393 1141 ntBASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 AC133561.1-201ENST00000568600 2415 ntBASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARFGEF3Q5TH69 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARFGEF3Q5TH69 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 AC073111.5-205ENST00000641717 521 ntBASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 ESRRAP2-201ENST00000418437 1549 ntBASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARFGEF3Q5TH69 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.27■□□□□ 0.52
ARFGEF3Q5TH69 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms