Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.3■■□□□ 1
CTSL3PQ5NE16 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTSL3PQ5NE16 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTSL3PQ5NE16 AC026471.6-201ENST00000622954 1905 ntBASIC21.3■■□□□ 1
CTSL3PQ5NE16 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.3■■□□□ 1
CTSL3PQ5NE16 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTSL3PQ5NE16 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.3■■□□□ 1
CTSL3PQ5NE16 AL136967.2-201ENST00000623968 743 ntBASIC21.3■■□□□ 1
CTSL3PQ5NE16 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CTSL3PQ5NE16 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.3■■□□□ 1
CTSL3PQ5NE16 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTSL3PQ5NE16 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.29■■□□□ 1
CTSL3PQ5NE16 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTSL3PQ5NE16 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.29■■□□□ 1
CTSL3PQ5NE16 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.29■■□□□ 1
CTSL3PQ5NE16 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CTSL3PQ5NE16 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.29■■□□□ 1
CTSL3PQ5NE16 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTSL3PQ5NE16 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 SUDS3P1-201ENST00000505831 966 ntBASIC21.28■■□□□ 1
CTSL3PQ5NE16 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 SMUG1P1-201ENST00000590640 811 ntBASIC21.28■■□□□ 1
CTSL3PQ5NE16 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CTSL3PQ5NE16 TSPY26P-201ENST00000476365 1326 ntBASIC21.28■■□□□ 1
CTSL3PQ5NE16 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSL3PQ5NE16 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTSL3PQ5NE16 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTSL3PQ5NE16 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTSL3PQ5NE16 RASA4CP-201ENST00000424092 1398 ntBASIC21.27■■□□□ 1
CTSL3PQ5NE16 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTSL3PQ5NE16 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 AC091305.1-201ENST00000479476 895 ntBASIC21.27■■□□□ 1
CTSL3PQ5NE16 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTSL3PQ5NE16 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTSL3PQ5NE16 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.27■■□□□ 1
CTSL3PQ5NE16 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CTSL3PQ5NE16 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CTSL3PQ5NE16 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTSL3PQ5NE16 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTSL3PQ5NE16 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 AP004607.7-201ENST00000527152 1677 ntBASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTSL3PQ5NE16 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms