Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 PFK26YIL107C 2484 nt3.6□□□□□ -1.83
DNL4Q08387 IPI3YNL182C 1668 nt3.6□□□□□ -1.83
DNL4Q08387 YHR022CYHR022C 771 nt3.6□□□□□ -1.83
DNL4Q08387 ARC15YIL062C 465 nt3.6□□□□□ -1.83
DNL4Q08387 RIM11YMR139W 1113 nt3.6□□□□□ -1.83
DNL4Q08387 YOR186WYOR186W 435 nt3.6□□□□□ -1.83
DNL4Q08387 YNR063WYNR063W 1824 nt3.6□□□□□ -1.83
DNL4Q08387 ZDS2YML109W 2829 nt3.6□□□□□ -1.83
DNL4Q08387 PRP3YDR473C 1410 nt3.6□□□□□ -1.83
DNL4Q08387 PRS5YOL061W 1491 nt3.6□□□□□ -1.83
DNL4Q08387 MEK1YOR351C 1494 nt3.6□□□□□ -1.83
DNL4Q08387 SHQ1YIL104C 1524 nt3.6□□□□□ -1.83
DNL4Q08387 LCB5YLR260W 2064 nt3.59□□□□□ -1.83
DNL4Q08387 YDL026WYDL026W 312 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)DtK(UUU)D 73 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)G1tK(UUU)G1 73 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)G2tK(UUU)G2 73 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)KtK(UUU)K 73 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)LtK(UUU)L 73 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)OtK(UUU)O 73 nt3.59□□□□□ -1.83
DNL4Q08387 tK(UUU)PtK(UUU)P 73 nt3.59□□□□□ -1.83
DNL4Q08387 YHR069C-AYHR069C-A 363 nt3.59□□□□□ -1.83
DNL4Q08387 BMT2YBR141C 1014 nt3.59□□□□□ -1.83
DNL4Q08387 SQS1YNL224C 2304 nt3.59□□□□□ -1.84
DNL4Q08387 TAO3YIL129C 7131 nt3.58□□□□□ -1.84
DNL4Q08387 RPS18AYDR450W 441 nt3.58□□□□□ -1.84
DNL4Q08387 ERV29YGR284C 933 nt3.58□□□□□ -1.84
DNL4Q08387 REH1YLR387C 1299 nt3.58□□□□□ -1.84
DNL4Q08387 RAD10YML095C 633 nt3.58□□□□□ -1.84
DNL4Q08387 VAM3YOR106W 852 nt3.58□□□□□ -1.84
DNL4Q08387 TMA16YOR252W 537 nt3.58□□□□□ -1.84
DNL4Q08387 MDN1YLR106C 14733 nt3.58□□□□□ -1.84
DNL4Q08387 TRS120YDR407C 3870 nt3.57□□□□□ -1.84
DNL4Q08387 MSS2YDL107W 1056 nt3.57□□□□□ -1.84
DNL4Q08387 RPC11YDR045C 333 nt3.57□□□□□ -1.84
DNL4Q08387 YDR222WYDR222W 1248 nt3.57□□□□□ -1.84
DNL4Q08387 YGR149WYGR149W 1299 nt3.57□□□□□ -1.84
DNL4Q08387 MSR1YHR091C 1932 nt3.57□□□□□ -1.84
DNL4Q08387 BET1YIL004C 429 nt3.57□□□□□ -1.84
DNL4Q08387 YUH1YJR099W 711 nt3.57□□□□□ -1.84
DNL4Q08387 YKT6YKL196C 603 nt3.57□□□□□ -1.84
DNL4Q08387 SED5YLR026C 1023 nt3.57□□□□□ -1.84
DNL4Q08387 MRPL51YPR100W 423 nt3.57□□□□□ -1.84
DNL4Q08387 MRPL37YBR268W 318 nt3.57□□□□□ -1.84
DNL4Q08387 NAT1YDL040C 2565 nt3.56□□□□□ -1.84
DNL4Q08387 ERJ5YFR041C 888 nt3.56□□□□□ -1.84
DNL4Q08387 TMC1YOR052C 453 nt3.56□□□□□ -1.84
DNL4Q08387 RPS9BYBR189W 588 nt3.56□□□□□ -1.84
DNL4Q08387 VID27YNL212W 2349 nt3.56□□□□□ -1.84
DNL4Q08387 ISW2YOR304W 3363 nt3.56□□□□□ -1.84
DNL4Q08387 UBP12YJL197W 3765 nt3.56□□□□□ -1.84
DNL4Q08387 TED1YIL039W 1422 nt3.55□□□□□ -1.84
DNL4Q08387 YCR007CYCR007C 720 nt3.55□□□□□ -1.84
DNL4Q08387 YDR336WYDR336W 945 nt3.55□□□□□ -1.84
DNL4Q08387 HAT2YEL056W 1206 nt3.55□□□□□ -1.84
DNL4Q08387 PSY3YLR376C 729 nt3.55□□□□□ -1.84
DNL4Q08387 BAG7YOR134W 1230 nt3.55□□□□□ -1.84
DNL4Q08387 DDP1YOR163W 567 nt3.55□□□□□ -1.84
DNL4Q08387 SSP2YOR242C 1116 nt3.55□□□□□ -1.84
DNL4Q08387 EXO5YBR163W 1758 nt3.55□□□□□ -1.84
DNL4Q08387 SSE2YBR169C 2082 nt3.55□□□□□ -1.84
DNL4Q08387 YAK1YJL141C 2424 nt3.54□□□□□ -1.84
DNL4Q08387 PMS1YNL082W 2622 nt3.54□□□□□ -1.84
DNL4Q08387 PCL2YDL127W 927 nt3.54□□□□□ -1.84
DNL4Q08387 MRPL11YDL202W 750 nt3.54□□□□□ -1.84
DNL4Q08387 RPS8BYER102W 603 nt3.54□□□□□ -1.84
DNL4Q08387 REE1YJL217W 597 nt3.54□□□□□ -1.84
DNL4Q08387 MTR2YKL186C 555 nt3.54□□□□□ -1.84
DNL4Q08387 TFA2YKR062W 987 nt3.54□□□□□ -1.84
DNL4Q08387 CTL1YMR180C 963 nt3.54□□□□□ -1.84
DNL4Q08387 SSO2YMR183C 888 nt3.54□□□□□ -1.84
DNL4Q08387 RPS8AYBL072C 603 nt3.54□□□□□ -1.84
DNL4Q08387 YNL144W-AYNL144W-A 84 nt3.54□□□□□ -1.84
DNL4Q08387 YBL094CYBL094C 333 nt3.54□□□□□ -1.84
DNL4Q08387 YOL166CYOL166C 339 nt3.54□□□□□ -1.84
DNL4Q08387 RPS7AYOR096W 573 nt3.54□□□□□ -1.84
DNL4Q08387 TAF14YPL129W 735 nt3.54□□□□□ -1.84
DNL4Q08387 CTK1YKL139W 1587 nt3.54□□□□□ -1.84
DNL4Q08387 NUP85YJR042W 2235 nt3.54□□□□□ -1.84
DNL4Q08387 YKL050CYKL050C 2769 nt3.53□□□□□ -1.84
DNL4Q08387 MGA1YGR249W 1371 nt3.53□□□□□ -1.84
DNL4Q08387 POP6YGR030C 477 nt3.53□□□□□ -1.84
DNL4Q08387 OKP1YGR179C 1221 nt3.53□□□□□ -1.84
DNL4Q08387 YAL064W-BYAL064W-B 381 nt3.53□□□□□ -1.84
DNL4Q08387 TRI1YMR233W 681 nt3.53□□□□□ -1.84
DNL4Q08387 AAH1YNL141W 1044 nt3.53□□□□□ -1.84
DNL4Q08387 YOR314WYOR314W 330 nt3.53□□□□□ -1.84
DNL4Q08387 YBR238CYBR238C 2196 nt3.53□□□□□ -1.84
DNL4Q08387 ETP1YHL010C 1758 nt3.53□□□□□ -1.84
DNL4Q08387 RPN2YIL075C 2838 nt3.52□□□□□ -1.85
DNL4Q08387 PWP2YCR057C 2772 nt3.52□□□□□ -1.85
DNL4Q08387 MSA1YOR066W 1890 nt3.52□□□□□ -1.85
DNL4Q08387 SPT16YGL207W 3108 nt3.52□□□□□ -1.85
DNL4Q08387 tR(UCU)Q1tR(UCU)Q1 73 nt3.52□□□□□ -1.85
DNL4Q08387 RPC17YJL011C 486 nt3.52□□□□□ -1.85
DNL4Q08387 EBP2YKL172W 1284 nt3.52□□□□□ -1.85
DNL4Q08387 AHP1YLR109W 531 nt3.52□□□□□ -1.85
DNL4Q08387 RPS28BYLR264W 204 nt3.52□□□□□ -1.85
DNL4Q08387 UTP25YIL091C 2166 nt3.51□□□□□ -1.85
DNL4Q08387 SMC3YJL074C 3693 nt3.51□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms