Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1AQ02539 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST1H1AQ02539 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.37■□□□□ 0.21
HIST1H1AQ02539 AL356740.2-201ENST00000601559 647 ntBASIC16.37■□□□□ 0.21
HIST1H1AQ02539 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H1AQ02539 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 AC241377.3-202ENST00000626088 1088 ntBASIC16.36■□□□□ 0.21
HIST1H1AQ02539 AC241585.3-202ENST00000628937 1088 ntBASIC16.36■□□□□ 0.21
HIST1H1AQ02539 AC245100.8-202ENST00000629247 1058 ntBASIC16.36■□□□□ 0.21
HIST1H1AQ02539 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H1AQ02539 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 GUSBP5-201ENST00000418136 578 ntBASIC16.35■□□□□ 0.21
HIST1H1AQ02539 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H1AQ02539 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H1AQ02539 FBXW4P1-201ENST00000426721 2239 ntBASIC16.34■□□□□ 0.21
HIST1H1AQ02539 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H1AQ02539 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H1AQ02539 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H1AQ02539 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.34■□□□□ 0.21
HIST1H1AQ02539 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H1AQ02539 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms