Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP1S1P61966 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
AP1S1P61966 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP1S1P61966 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP1S1P61966 AC026271.2-201ENST00000428091 497 ntBASIC21.73■■□□□ 1.07
AP1S1P61966 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.73■■□□□ 1.07
AP1S1P61966 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP1S1P61966 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
AP1S1P61966 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AP1S1P61966 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AP1S1P61966 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.73■■□□□ 1.07
AP1S1P61966 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.72■■□□□ 1.07
AP1S1P61966 AC005224.4-201ENST00000583262 1652 ntBASIC21.72■■□□□ 1.07
AP1S1P61966 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP1S1P61966 ECEL1P1-201ENST00000373592 1742 ntBASIC21.72■■□□□ 1.07
AP1S1P61966 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.72■■□□□ 1.07
AP1S1P61966 AC092053.2-201ENST00000640557 1818 ntBASIC21.72■■□□□ 1.07
AP1S1P61966 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AP1S1P61966 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
AP1S1P61966 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.72■■□□□ 1.07
AP1S1P61966 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.72■■□□□ 1.07
AP1S1P61966 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.72■■□□□ 1.07
AP1S1P61966 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.72■■□□□ 1.07
AP1S1P61966 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP1S1P61966 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
AP1S1P61966 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.72■■□□□ 1.07
AP1S1P61966 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP1S1P61966 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP1S1P61966 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
AP1S1P61966 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.71■■□□□ 1.07
AP1S1P61966 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
AP1S1P61966 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.71■■□□□ 1.07
AP1S1P61966 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.71■■□□□ 1.07
AP1S1P61966 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.71■■□□□ 1.07
AP1S1P61966 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AP1S1P61966 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.71■■□□□ 1.07
AP1S1P61966 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
AP1S1P61966 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
AP1S1P61966 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
AP1S1P61966 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.7■■□□□ 1.07
AP1S1P61966 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
AP1S1P61966 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
AP1S1P61966 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP1S1P61966 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP1S1P61966 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP1S1P61966 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
AP1S1P61966 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AP1S1P61966 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.7■■□□□ 1.06
AP1S1P61966 TERF1P2-201ENST00000583350 1212 ntBASIC21.7■■□□□ 1.06
AP1S1P61966 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.7■■□□□ 1.06
AP1S1P61966 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.7■■□□□ 1.06
AP1S1P61966 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
AP1S1P61966 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
AP1S1P61966 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
AP1S1P61966 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.7■■□□□ 1.06
AP1S1P61966 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
AP1S1P61966 AL117328.2-201ENST00000624617 1940 ntBASIC21.69■■□□□ 1.06
AP1S1P61966 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
AP1S1P61966 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.69■■□□□ 1.06
AP1S1P61966 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP1S1P61966 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP1S1P61966 CCDC92B-201ENST00000575506 885 ntBASIC21.69■■□□□ 1.06
AP1S1P61966 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
AP1S1P61966 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.69■■□□□ 1.06
AP1S1P61966 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
AP1S1P61966 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
AP1S1P61966 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.69■■□□□ 1.06
AP1S1P61966 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AP1S1P61966 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
AP1S1P61966 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.68■■□□□ 1.06
AP1S1P61966 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.68■■□□□ 1.06
AP1S1P61966 AC087623.3-201ENST00000607047 1098 ntBASIC21.68■■□□□ 1.06
AP1S1P61966 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.68■■□□□ 1.06
AP1S1P61966 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.68■■□□□ 1.06
AP1S1P61966 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.68■■□□□ 1.06
AP1S1P61966 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.68■■□□□ 1.06
AP1S1P61966 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AP1S1P61966 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AP1S1P61966 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.67■■□□□ 1.06
AP1S1P61966 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.67■■□□□ 1.06
AP1S1P61966 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms