Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2D3P61077 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2D3P61077 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2D3P61077 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.29■□□□□ 0.04
UBE2D3P61077 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBE2D3P61077 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2D3P61077 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 FBXW4P1-201ENST00000426721 2239 ntBASIC15.28■□□□□ 0.04
UBE2D3P61077 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.28■□□□□ 0.04
UBE2D3P61077 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.28■□□□□ 0.04
UBE2D3P61077 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.28■□□□□ 0.04
UBE2D3P61077 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UBE2D3P61077 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.28■□□□□ 0.04
UBE2D3P61077 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
UBE2D3P61077 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBE2D3P61077 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UBE2D3P61077 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.27■□□□□ 0.04
UBE2D3P61077 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBE2D3P61077 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBE2D3P61077 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UBE2D3P61077 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.27■□□□□ 0.04
UBE2D3P61077 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBE2D3P61077 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBE2D3P61077 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBE2D3P61077 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBE2D3P61077 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBE2D3P61077 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.27■□□□□ 0.04
UBE2D3P61077 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.27■□□□□ 0.04
UBE2D3P61077 AL035685.1-201ENST00000636663 812 ntBASIC15.27■□□□□ 0.04
UBE2D3P61077 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.27■□□□□ 0.03
UBE2D3P61077 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBE2D3P61077 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBE2D3P61077 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBE2D3P61077 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBE2D3P61077 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBE2D3P61077 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBE2D3P61077 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
UBE2D3P61077 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBE2D3P61077 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
UBE2D3P61077 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.26■□□□□ 0.03
UBE2D3P61077 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 AL356740.2-201ENST00000601559 647 ntBASIC15.26■□□□□ 0.03
UBE2D3P61077 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBE2D3P61077 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.26■□□□□ 0.03
UBE2D3P61077 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBE2D3P61077 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.26■□□□□ 0.03
UBE2D3P61077 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
UBE2D3P61077 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.26■□□□□ 0.03
UBE2D3P61077 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.25■□□□□ 0.03
UBE2D3P61077 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
UBE2D3P61077 AC133637.1-201ENST00000624115 1537 ntBASIC15.25■□□□□ 0.03
UBE2D3P61077 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.25■□□□□ 0.03
UBE2D3P61077 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UBE2D3P61077 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBE2D3P61077 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBE2D3P61077 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
UBE2D3P61077 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.24■□□□□ 0.03
UBE2D3P61077 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.24■□□□□ 0.03
UBE2D3P61077 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.24■□□□□ 0.03
UBE2D3P61077 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.24■□□□□ 0.03
UBE2D3P61077 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 pRNA.6-201ENST00000610482 90 ntBASIC15.24■□□□□ 0.03
UBE2D3P61077 pRNA.5-201ENST00000612139 90 ntBASIC15.24■□□□□ 0.03
UBE2D3P61077 pRNA.11-201ENST00000618423 90 ntBASIC15.24■□□□□ 0.03
UBE2D3P61077 pRNA.13-201ENST00000619112 90 ntBASIC15.24■□□□□ 0.03
UBE2D3P61077 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.24■□□□□ 0.03
UBE2D3P61077 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBE2D3P61077 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
UBE2D3P61077 AL391422.3-201ENST00000603791 2761 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms