Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 PRS5YOL061W 1491 nt3.04□□□□□ -1.92
UFD1P53044 LCB5YLR260W 2064 nt3.04□□□□□ -1.92
UFD1P53044 YDR290WYDR290W 330 nt3.04□□□□□ -1.92
UFD1P53044 DID4YKL002W 699 nt3.04□□□□□ -1.92
UFD1P53044 RAD33YML011C 534 nt3.04□□□□□ -1.92
UFD1P53044 TEX1YNL253W 1269 nt3.04□□□□□ -1.92
UFD1P53044 TMC1YOR052C 453 nt3.04□□□□□ -1.92
UFD1P53044 OPY1YBR129C 987 nt3.04□□□□□ -1.92
UFD1P53044 VPS27YNR006W 1869 nt3.04□□□□□ -1.92
UFD1P53044 TRM1YDR120C 1713 nt3.04□□□□□ -1.92
UFD1P53044 YKR015CYKR015C 1707 nt3.04□□□□□ -1.92
UFD1P53044 RPN1YHR027C 2982 nt3.03□□□□□ -1.92
UFD1P53044 SET1YHR119W 3243 nt3.03□□□□□ -1.92
UFD1P53044 CLG1YGL215W 1359 nt3.03□□□□□ -1.92
UFD1P53044 YCR015CYCR015C 954 nt3.03□□□□□ -1.92
UFD1P53044 YDR391CYDR391C 699 nt3.03□□□□□ -1.92
UFD1P53044 SUP56tL(CAA)A 82 nt3.03□□□□□ -1.92
UFD1P53044 SUP53tL(CAA)C 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)DtL(CAA)D 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)G1tL(CAA)G1 82 nt3.03□□□□□ -1.92
UFD1P53044 SUP54tL(CAA)G2 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)G3tL(CAA)G3 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)KtL(CAA)K 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)LtL(CAA)L 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)MtL(CAA)M 82 nt3.03□□□□□ -1.92
UFD1P53044 tL(CAA)NtL(CAA)N 82 nt3.03□□□□□ -1.92
UFD1P53044 FOL2YGR267C 732 nt3.03□□□□□ -1.92
UFD1P53044 ENT3YJR125C 1227 nt3.03□□□□□ -1.92
UFD1P53044 HMX1YLR205C 954 nt3.03□□□□□ -1.92
UFD1P53044 YBL065WYBL065W 345 nt3.03□□□□□ -1.92
UFD1P53044 MDJ2YNL328C 441 nt3.03□□□□□ -1.92
UFD1P53044 SPO71YDR104C 3738 nt3.03□□□□□ -1.92
UFD1P53044 CLN2YPL256C 1638 nt3.03□□□□□ -1.92
UFD1P53044 GPI1YGR216C 1830 nt3.03□□□□□ -1.93
UFD1P53044 MNR2YKL064W 2910 nt3.02□□□□□ -1.93
UFD1P53044 DDI2YFL061W 678 nt3.02□□□□□ -1.93
UFD1P53044 LST7YGR057C 729 nt3.02□□□□□ -1.93
UFD1P53044 POG1YIL122W 1056 nt3.02□□□□□ -1.93
UFD1P53044 YLR363W-AYLR363W-A 258 nt3.02□□□□□ -1.93
UFD1P53044 DDI3YNL335W 678 nt3.02□□□□□ -1.93
UFD1P53044 TIR2YOR010C 756 nt3.02□□□□□ -1.93
UFD1P53044 STT4YLR305C 5703 nt3.02□□□□□ -1.93
UFD1P53044 SEC6YIL068C 2418 nt3.02□□□□□ -1.93
UFD1P53044 GIS4YML006C 2325 nt3.02□□□□□ -1.93
UFD1P53044 YFL040WYFL040W 1623 nt3.01□□□□□ -1.93
UFD1P53044 PKH1YDR490C 2301 nt3.01□□□□□ -1.93
UFD1P53044 BSC1YDL037C 987 nt3.01□□□□□ -1.93
UFD1P53044 PSF1YDR013W 627 nt3.01□□□□□ -1.93
UFD1P53044 CTH1YDR151C 978 nt3.01□□□□□ -1.93
UFD1P53044 TRP4YDR354W 1143 nt3.01□□□□□ -1.93
UFD1P53044 PUG1YER185W 912 nt3.01□□□□□ -1.93
UFD1P53044 EBP2YKL172W 1284 nt3.01□□□□□ -1.93
UFD1P53044 TFA2YKR062W 987 nt3.01□□□□□ -1.93
UFD1P53044 YLL047WYLL047W 384 nt3.01□□□□□ -1.93
UFD1P53044 DSL1YNL258C 2265 nt3.01□□□□□ -1.93
UFD1P53044 ISW2YOR304W 3363 nt3.01□□□□□ -1.93
UFD1P53044 UBP12YJL197W 3765 nt3.01□□□□□ -1.93
UFD1P53044 SLA1YBL007C 3735 nt3.01□□□□□ -1.93
UFD1P53044 VPS53YJL029C 2469 nt3□□□□□ -1.93
UFD1P53044 SMI1YGR229C 1518 nt3□□□□□ -1.93
UFD1P53044 AGA1YNR044W 2178 nt3□□□□□ -1.93
UFD1P53044 POL2YNL262W 6669 nt3□□□□□ -1.93
UFD1P53044 YCR007CYCR007C 720 nt3□□□□□ -1.93
UFD1P53044 RPA14YDR156W 414 nt3□□□□□ -1.93
UFD1P53044 KEG1YFR042W 603 nt3□□□□□ -1.93
UFD1P53044 YGL258W-AYGL258W-A 234 nt3□□□□□ -1.93
UFD1P53044 ERV29YGR284C 933 nt3□□□□□ -1.93
UFD1P53044 YIR018C-AYIR018C-A 138 nt3□□□□□ -1.93
UFD1P53044 TIF34YMR146C 1044 nt3□□□□□ -1.93
UFD1P53044 YMR306C-AYMR306C-A 390 nt3□□□□□ -1.93
UFD1P53044 AAH1YNL141W 1044 nt3□□□□□ -1.93
UFD1P53044 GIS2YNL255C 462 nt3□□□□□ -1.93
UFD1P53044 YOR186WYOR186W 435 nt3□□□□□ -1.93
UFD1P53044 MCM16YPR046W 546 nt3□□□□□ -1.93
UFD1P53044 MRH4YGL064C 1686 nt3□□□□□ -1.93
UFD1P53044 HAP4YKL109W 1665 nt3□□□□□ -1.93
UFD1P53044 YVC1YOR087W 2028 nt3□□□□□ -1.93
UFD1P53044 YEL025CYEL025C 3567 nt3□□□□□ -1.93
UFD1P53044 FUN12YAL035W 3009 nt2.99□□□□□ -1.93
UFD1P53044 NAT1YDL040C 2565 nt2.99□□□□□ -1.93
UFD1P53044 RRP8YDR083W 1179 nt2.99□□□□□ -1.93
UFD1P53044 BCD1YHR040W 1101 nt2.99□□□□□ -1.93
UFD1P53044 UNG1YML021C 1080 nt2.99□□□□□ -1.93
UFD1P53044 RIB4YOL143C 510 nt2.99□□□□□ -1.93
UFD1P53044 RPS11BYBR048W 471 nt2.99□□□□□ -1.93
UFD1P53044 MAK21YDR060W 3078 nt2.99□□□□□ -1.93
UFD1P53044 RCY1YJL204C 2523 nt2.99□□□□□ -1.93
UFD1P53044 DSS1YMR287C 2910 nt2.99□□□□□ -1.93
UFD1P53044 LRG1YDL240W 3054 nt2.99□□□□□ -1.93
UFD1P53044 YSP2YDR326C 4317 nt2.98□□□□□ -1.93
UFD1P53044 KTR6YPL053C 1341 nt2.98□□□□□ -1.93
UFD1P53044 ROM1YGR070W 3468 nt2.98□□□□□ -1.93
UFD1P53044 RAD5YLR032W 3510 nt2.98□□□□□ -1.93
UFD1P53044 IMP3YHR148W 552 nt2.98□□□□□ -1.93
UFD1P53044 RUF21RUF21 707 nt2.98□□□□□ -1.93
UFD1P53044 SAS5YOR213C 747 nt2.98□□□□□ -1.93
UFD1P53044 OXR1YPL196W 822 nt2.98□□□□□ -1.93
UFD1P53044 GRX1YCL035C 333 nt2.98□□□□□ -1.93
UFD1P53044 UTP25YIL091C 2166 nt2.98□□□□□ -1.93
UFD1P53044 FAR1YJL157C 2493 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 98.7 ms