Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.44■□□□□ 0.86
TPRP12270 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.44■□□□□ 0.86
TPRP12270 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TPRP12270 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TPRP12270 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TPRP12270 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.44■□□□□ 0.86
TPRP12270 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPRP12270 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TPRP12270 AC093787.1-201ENST00000450396 207 ntBASIC20.43■□□□□ 0.86
TPRP12270 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPRP12270 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.43■□□□□ 0.86
TPRP12270 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.43■□□□□ 0.86
TPRP12270 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.43■□□□□ 0.86
TPRP12270 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.43■□□□□ 0.86
TPRP12270 AC092865.7-201ENST00000641832 219 ntBASIC20.43■□□□□ 0.86
TPRP12270 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPRP12270 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPRP12270 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.43■□□□□ 0.86
TPRP12270 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPRP12270 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.43■□□□□ 0.86
TPRP12270 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.43■□□□□ 0.86
TPRP12270 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPRP12270 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPRP12270 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPRP12270 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPRP12270 AL049637.2-201ENST00000641778 930 ntBASIC20.42■□□□□ 0.86
TPRP12270 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPRP12270 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.42■□□□□ 0.86
TPRP12270 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TPRP12270 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
TPRP12270 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.42■□□□□ 0.86
TPRP12270 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.42■□□□□ 0.86
TPRP12270 AC005224.4-201ENST00000583262 1652 ntBASIC20.42■□□□□ 0.86
TPRP12270 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.41■□□□□ 0.86
TPRP12270 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPRP12270 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPRP12270 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPRP12270 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.41■□□□□ 0.86
TPRP12270 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPRP12270 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.41■□□□□ 0.86
TPRP12270 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPRP12270 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TPRP12270 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.41■□□□□ 0.86
TPRP12270 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPRP12270 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPRP12270 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.4■□□□□ 0.86
TPRP12270 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.4■□□□□ 0.86
TPRP12270 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.4■□□□□ 0.86
TPRP12270 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.4■□□□□ 0.86
TPRP12270 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.4■□□□□ 0.86
TPRP12270 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TPRP12270 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.4■□□□□ 0.86
TPRP12270 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TPRP12270 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.39■□□□□ 0.86
TPRP12270 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.39■□□□□ 0.86
TPRP12270 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TPRP12270 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.39■□□□□ 0.85
TPRP12270 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
TPRP12270 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.39■□□□□ 0.85
TPRP12270 AC008403.3-201ENST00000598924 454 ntBASIC20.39■□□□□ 0.85
TPRP12270 AL121894.2-201ENST00000602977 491 ntBASIC20.39■□□□□ 0.85
TPRP12270 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPRP12270 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
TPRP12270 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TPRP12270 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
TPRP12270 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPRP12270 TSPY15P-201ENST00000457163 923 ntBASIC20.38■□□□□ 0.85
TPRP12270 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.38■□□□□ 0.85
TPRP12270 MIR4785-201ENST00000585005 73 ntBASIC20.38■□□□□ 0.85
TPRP12270 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.38■□□□□ 0.85
TPRP12270 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPRP12270 TERF1P5-201ENST00000477545 1207 ntBASIC20.38■□□□□ 0.85
TPRP12270 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPRP12270 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPRP12270 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TPRP12270 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPRP12270 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.38■□□□□ 0.85
TPRP12270 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPRP12270 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPRP12270 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPRP12270 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPRP12270 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.37■□□□□ 0.85
TPRP12270 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.37■□□□□ 0.85
TPRP12270 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.37■□□□□ 0.85
TPRP12270 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPRP12270 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPRP12270 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.37■□□□□ 0.85
TPRP12270 KRT126P-201ENST00000549467 1181 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms