Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
GRIN3BO60391 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.69■■□□□ 1.86
GRIN3BO60391 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
GRIN3BO60391 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
GRIN3BO60391 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.68■■□□□ 1.86
GRIN3BO60391 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.68■■□□□ 1.86
GRIN3BO60391 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
GRIN3BO60391 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.68■■□□□ 1.86
GRIN3BO60391 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
GRIN3BO60391 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
GRIN3BO60391 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
GRIN3BO60391 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
GRIN3BO60391 RPPH1-201ENST00000516869 333 ntBASIC26.68■■□□□ 1.86
GRIN3BO60391 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.68■■□□□ 1.86
GRIN3BO60391 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.68■■□□□ 1.86
GRIN3BO60391 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.68■■□□□ 1.86
GRIN3BO60391 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.68■■□□□ 1.86
GRIN3BO60391 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
GRIN3BO60391 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
GRIN3BO60391 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
GRIN3BO60391 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
GRIN3BO60391 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
GRIN3BO60391 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.67■■□□□ 1.86
GRIN3BO60391 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
GRIN3BO60391 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
GRIN3BO60391 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.67■■□□□ 1.86
GRIN3BO60391 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.67■■□□□ 1.86
GRIN3BO60391 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.67■■□□□ 1.86
GRIN3BO60391 BX088651.1-201ENST00000540551 451 ntBASIC26.67■■□□□ 1.86
GRIN3BO60391 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.67■■□□□ 1.86
GRIN3BO60391 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.67■■□□□ 1.86
GRIN3BO60391 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.67■■□□□ 1.86
GRIN3BO60391 AC004687.1-201ENST00000579003 1625 ntBASIC26.67■■□□□ 1.86
GRIN3BO60391 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
GRIN3BO60391 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
GRIN3BO60391 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
GRIN3BO60391 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
GRIN3BO60391 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
GRIN3BO60391 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.66■■□□□ 1.86
GRIN3BO60391 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
GRIN3BO60391 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.66■■□□□ 1.86
GRIN3BO60391 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
GRIN3BO60391 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.66■■□□□ 1.86
GRIN3BO60391 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.66■■□□□ 1.86
GRIN3BO60391 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.65■■□□□ 1.86
GRIN3BO60391 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
GRIN3BO60391 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.65■■□□□ 1.86
GRIN3BO60391 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.65■■□□□ 1.86
GRIN3BO60391 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.65■■□□□ 1.86
GRIN3BO60391 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.65■■□□□ 1.86
GRIN3BO60391 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.65■■□□□ 1.86
GRIN3BO60391 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
GRIN3BO60391 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
GRIN3BO60391 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
GRIN3BO60391 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.64■■□□□ 1.86
GRIN3BO60391 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
GRIN3BO60391 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
GRIN3BO60391 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.64■■□□□ 1.86
GRIN3BO60391 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.64■■□□□ 1.86
GRIN3BO60391 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.64■■□□□ 1.86
GRIN3BO60391 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
GRIN3BO60391 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
GRIN3BO60391 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GRIN3BO60391 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.63■■□□□ 1.85
GRIN3BO60391 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
GRIN3BO60391 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
GRIN3BO60391 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.63■■□□□ 1.85
GRIN3BO60391 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
GRIN3BO60391 AC092803.2-201ENST00000564287 1899 ntBASIC26.63■■□□□ 1.85
GRIN3BO60391 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.63■■□□□ 1.85
GRIN3BO60391 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.62■■□□□ 1.85
GRIN3BO60391 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
GRIN3BO60391 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
GRIN3BO60391 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
GRIN3BO60391 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
GRIN3BO60391 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
GRIN3BO60391 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.61■■□□□ 1.85
GRIN3BO60391 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
GRIN3BO60391 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.61■■□□□ 1.85
GRIN3BO60391 C1QBPP2-201ENST00000528754 825 ntBASIC26.61■■□□□ 1.85
GRIN3BO60391 CYP2T3P-201ENST00000601990 817 ntBASIC26.61■■□□□ 1.85
GRIN3BO60391 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
GRIN3BO60391 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.61■■□□□ 1.85
GRIN3BO60391 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
GRIN3BO60391 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
GRIN3BO60391 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.6■■□□□ 1.85
GRIN3BO60391 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms