Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.11■□□□□ 0.97
Trdmt1O55055 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.11■□□□□ 0.97
Trdmt1O55055 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trdmt1O55055 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.11■□□□□ 0.97
Trdmt1O55055 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.11■□□□□ 0.97
Trdmt1O55055 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trdmt1O55055 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trdmt1O55055 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.11■□□□□ 0.97
Trdmt1O55055 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trdmt1O55055 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trdmt1O55055 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trdmt1O55055 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trdmt1O55055 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
Trdmt1O55055 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trdmt1O55055 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.09■□□□□ 0.97
Trdmt1O55055 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trdmt1O55055 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trdmt1O55055 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trdmt1O55055 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trdmt1O55055 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trdmt1O55055 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Gm2559-201ENSMUST00000201323 363 ntBASIC21.08■□□□□ 0.97
Trdmt1O55055 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Trdmt1O55055 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trdmt1O55055 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trdmt1O55055 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trdmt1O55055 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trdmt1O55055 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trdmt1O55055 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Trdmt1O55055 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trdmt1O55055 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trdmt1O55055 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trdmt1O55055 Gm5643-201ENSMUST00000117081 966 ntBASIC21.07■□□□□ 0.96
Trdmt1O55055 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trdmt1O55055 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trdmt1O55055 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trdmt1O55055 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trdmt1O55055 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trdmt1O55055 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trdmt1O55055 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trdmt1O55055 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trdmt1O55055 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trdmt1O55055 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trdmt1O55055 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trdmt1O55055 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.06■□□□□ 0.96
Trdmt1O55055 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trdmt1O55055 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.05■□□□□ 0.96
Trdmt1O55055 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trdmt1O55055 Dio3-201ENSMUST00000097228 1449 ntBASIC21.05■□□□□ 0.96
Trdmt1O55055 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trdmt1O55055 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trdmt1O55055 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trdmt1O55055 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trdmt1O55055 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trdmt1O55055 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trdmt1O55055 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trdmt1O55055 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trdmt1O55055 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trdmt1O55055 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Trdmt1O55055 Mir7071-201ENSMUST00000184847 69 ntBASIC21.04■□□□□ 0.96
Trdmt1O55055 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.04■□□□□ 0.96
Trdmt1O55055 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.04■□□□□ 0.96
Trdmt1O55055 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trdmt1O55055 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trdmt1O55055 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trdmt1O55055 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trdmt1O55055 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trdmt1O55055 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trdmt1O55055 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trdmt1O55055 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trdmt1O55055 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trdmt1O55055 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trdmt1O55055 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trdmt1O55055 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trdmt1O55055 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms