Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Per2O54943 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Per2O54943 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.81■□□□□ 0.76
Per2O54943 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Per2O54943 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Per2O54943 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Per2O54943 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.8■□□□□ 0.76
Per2O54943 Gm43017-201ENSMUST00000198296 752 ntBASIC19.8■□□□□ 0.76
Per2O54943 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Per2O54943 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Per2O54943 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Per2O54943 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Per2O54943 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Per2O54943 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.79■□□□□ 0.76
Per2O54943 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Per2O54943 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Per2O54943 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Per2O54943 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Per2O54943 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Per2O54943 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Per2O54943 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Gm40848-201ENSMUST00000221998 324 ntBASIC19.78■□□□□ 0.76
Per2O54943 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Per2O54943 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Per2O54943 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Per2O54943 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Per2O54943 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Per2O54943 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 Gm15039-201ENSMUST00000118914 875 ntBASIC19.77■□□□□ 0.76
Per2O54943 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.77■□□□□ 0.76
Per2O54943 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Per2O54943 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.77■□□□□ 0.76
Per2O54943 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Per2O54943 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Per2O54943 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.76■□□□□ 0.75
Per2O54943 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Per2O54943 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Per2O54943 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.76■□□□□ 0.75
Per2O54943 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Per2O54943 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Per2O54943 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Per2O54943 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Per2O54943 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms