Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 MIR638-201ENST00000385237 100 ntBASIC19.22■□□□□ 0.67
TRAF3IP2O43734 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 LINC00565-201ENST00000562710 2331 ntBASIC19.22■□□□□ 0.67
TRAF3IP2O43734 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRAF3IP2O43734 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 AC142381.2-201ENST00000566120 298 ntBASIC19.21■□□□□ 0.67
TRAF3IP2O43734 AC005837.3-201ENST00000612163 286 ntBASIC19.21■□□□□ 0.67
TRAF3IP2O43734 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF3IP2O43734 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 SMUG1P1-201ENST00000590640 811 ntBASIC19.2■□□□□ 0.66
TRAF3IP2O43734 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 FAM99A-202ENST00000538190 1989 ntBASIC19.2■□□□□ 0.66
TRAF3IP2O43734 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP2O43734 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRAF3IP2O43734 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRAF3IP2O43734 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP2O43734 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms