Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1AO00555 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1AO00555 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1AO00555 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.72■□□□□ 0.91
CACNA1AO00555 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1AO00555 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CACNA1AO00555 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CACNA1AO00555 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1AO00555 AC233263.1-201ENST00000578059 224 ntBASIC20.71■□□□□ 0.91
CACNA1AO00555 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1AO00555 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1AO00555 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 TSPY7P-201ENST00000431358 1114 ntBASIC20.7■□□□□ 0.9
CACNA1AO00555 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.7■□□□□ 0.9
CACNA1AO00555 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA1AO00555 MIR4785-201ENST00000585005 73 ntBASIC20.7■□□□□ 0.9
CACNA1AO00555 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CACNA1AO00555 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CACNA1AO00555 AL162412.1-201ENST00000567129 965 ntBASIC20.7■□□□□ 0.9
CACNA1AO00555 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1AO00555 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1AO00555 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1AO00555 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA1AO00555 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA1AO00555 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA1AO00555 AL353708.3-201ENST00000610272 989 ntBASIC20.69■□□□□ 0.9
CACNA1AO00555 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1AO00555 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA1AO00555 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA1AO00555 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA1AO00555 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA1AO00555 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA1AO00555 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA1AO00555 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1AO00555 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1AO00555 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1AO00555 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.68■□□□□ 0.9
CACNA1AO00555 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA1AO00555 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.68■□□□□ 0.9
CACNA1AO00555 SLC6A10P-202ENST00000431994 2058 ntBASIC20.68■□□□□ 0.9
CACNA1AO00555 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1AO00555 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1AO00555 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA1AO00555 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CACNA1AO00555 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA1AO00555 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA1AO00555 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNA1AO00555 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CACNA1AO00555 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA1AO00555 AL355075.4-201ENST00000554988 638 ntBASIC20.67■□□□□ 0.9
CACNA1AO00555 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA1AO00555 RN7SL471P-201ENST00000580476 299 ntBASIC20.67■□□□□ 0.9
CACNA1AO00555 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CACNA1AO00555 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNA1AO00555 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA1AO00555 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1AO00555 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA1AO00555 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1AO00555 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1AO00555 RPS2P55-201ENST00000397318 883 ntBASIC20.67■□□□□ 0.9
CACNA1AO00555 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1AO00555 TSPY15P-201ENST00000457163 923 ntBASIC20.67■□□□□ 0.9
CACNA1AO00555 AC107956.1-201ENST00000494359 873 ntBASIC20.67■□□□□ 0.9
CACNA1AO00555 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNA1AO00555 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CACNA1AO00555 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA1AO00555 AC069544.1-201ENST00000609399 999 ntBASIC20.66■□□□□ 0.9
CACNA1AO00555 LINC01529-204ENST00000636474 1715 ntBASIC20.66■□□□□ 0.9
CACNA1AO00555 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1AO00555 AC010980.2-201ENST00000587099 1412 ntBASIC20.66■□□□□ 0.9
CACNA1AO00555 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CACNA1AO00555 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CACNA1AO00555 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.66■□□□□ 0.9
CACNA1AO00555 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1AO00555 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CACNA1AO00555 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1AO00555 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1AO00555 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNA1AO00555 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1AO00555 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA1AO00555 AC068587.7-201ENST00000641602 218 ntBASIC20.65■□□□□ 0.9
CACNA1AO00555 AC009237.3-201ENST00000393279 1427 ntBASIC20.65■□□□□ 0.9
CACNA1AO00555 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CACNA1AO00555 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.65■□□□□ 0.9
CACNA1AO00555 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA1AO00555 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA1AO00555 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA1AO00555 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CACNA1AO00555 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1AO00555 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.65■□□□□ 0.9
CACNA1AO00555 AL135905.2-201ENST00000584934 1404 ntBASIC20.65■□□□□ 0.9
CACNA1AO00555 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.64■□□□□ 0.9
CACNA1AO00555 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.64■□□□□ 0.9
CACNA1AO00555 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA1AO00555 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms