Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA4O00483 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA4O00483 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA4O00483 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFA4O00483 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA4O00483 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NDUFA4O00483 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFA4O00483 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
NDUFA4O00483 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NDUFA4O00483 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFA4O00483 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NDUFA4O00483 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.54■□□□□ 0.24
NDUFA4O00483 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.54■□□□□ 0.24
NDUFA4O00483 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA4O00483 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFA4O00483 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.53■□□□□ 0.24
NDUFA4O00483 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFA4O00483 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.53■□□□□ 0.24
NDUFA4O00483 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NDUFA4O00483 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.53■□□□□ 0.24
NDUFA4O00483 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.53■□□□□ 0.24
NDUFA4O00483 AL031432.3-201ENST00000607698 485 ntBASIC16.53■□□□□ 0.24
NDUFA4O00483 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFA4O00483 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFA4O00483 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFA4O00483 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
NDUFA4O00483 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFA4O00483 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 TSPY26P-201ENST00000476365 1326 ntBASIC16.52■□□□□ 0.24
NDUFA4O00483 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.52■□□□□ 0.24
NDUFA4O00483 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.52■□□□□ 0.24
NDUFA4O00483 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.52■□□□□ 0.24
NDUFA4O00483 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 AL136967.2-201ENST00000623968 743 ntBASIC16.52■□□□□ 0.24
NDUFA4O00483 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDUFA4O00483 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA4O00483 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA4O00483 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA4O00483 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDUFA4O00483 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.51■□□□□ 0.23
NDUFA4O00483 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 FAM99A-202ENST00000538190 1989 ntBASIC16.51■□□□□ 0.23
NDUFA4O00483 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.51■□□□□ 0.23
NDUFA4O00483 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NDUFA4O00483 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.51■□□□□ 0.23
NDUFA4O00483 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NDUFA4O00483 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NDUFA4O00483 SUDS3P1-201ENST00000505831 966 ntBASIC16.51■□□□□ 0.23
NDUFA4O00483 AC142381.2-201ENST00000566120 298 ntBASIC16.51■□□□□ 0.23
NDUFA4O00483 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.51■□□□□ 0.23
NDUFA4O00483 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NDUFA4O00483 LINC00565-201ENST00000562710 2331 ntBASIC16.51■□□□□ 0.23
NDUFA4O00483 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDUFA4O00483 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NDUFA4O00483 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NDUFA4O00483 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.5■□□□□ 0.23
NDUFA4O00483 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
NDUFA4O00483 AP004607.7-201ENST00000527152 1677 ntBASIC16.5■□□□□ 0.23
NDUFA4O00483 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.5■□□□□ 0.23
NDUFA4O00483 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NDUFA4O00483 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
NDUFA4O00483 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms