Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RASA4CP-201ENST00000424092 1398 ntBASIC20.57■□□□□ 0.88
RTCAO00442 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.56■□□□□ 0.88
RTCAO00442 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 MIR638-201ENST00000385237 100 ntBASIC20.56■□□□□ 0.88
RTCAO00442 AC091305.1-201ENST00000479476 895 ntBASIC20.56■□□□□ 0.88
RTCAO00442 AC142381.2-201ENST00000566120 298 ntBASIC20.56■□□□□ 0.88
RTCAO00442 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.56■□□□□ 0.88
RTCAO00442 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RTCAO00442 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
RTCAO00442 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RTCAO00442 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.56■□□□□ 0.88
RTCAO00442 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RTCAO00442 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RTCAO00442 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCAO00442 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTCAO00442 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.55■□□□□ 0.88
RTCAO00442 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RTCAO00442 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.55■□□□□ 0.88
RTCAO00442 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.55■□□□□ 0.88
RTCAO00442 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.55■□□□□ 0.88
RTCAO00442 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.55■□□□□ 0.88
RTCAO00442 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RTCAO00442 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCAO00442 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RTCAO00442 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.55■□□□□ 0.88
RTCAO00442 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.54■□□□□ 0.88
RTCAO00442 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTCAO00442 FAM99A-202ENST00000538190 1989 ntBASIC20.54■□□□□ 0.88
RTCAO00442 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCAO00442 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RTCAO00442 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.53■□□□□ 0.88
RTCAO00442 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCAO00442 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCAO00442 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.53■□□□□ 0.88
RTCAO00442 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCAO00442 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCAO00442 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.52■□□□□ 0.88
RTCAO00442 FBXW4P1-201ENST00000426721 2239 ntBASIC20.52■□□□□ 0.88
RTCAO00442 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.52■□□□□ 0.88
RTCAO00442 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.52■□□□□ 0.88
RTCAO00442 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTCAO00442 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.52■□□□□ 0.88
RTCAO00442 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCAO00442 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
RTCAO00442 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTCAO00442 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTCAO00442 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTCAO00442 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTCAO00442 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RTCAO00442 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 AC026471.6-201ENST00000622954 1905 ntBASIC20.51■□□□□ 0.87
RTCAO00442 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.51■□□□□ 0.87
RTCAO00442 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTCAO00442 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.51■□□□□ 0.87
RTCAO00442 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.51■□□□□ 0.87
RTCAO00442 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.51■□□□□ 0.87
RTCAO00442 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.51■□□□□ 0.87
RTCAO00442 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RTCAO00442 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCAO00442 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.51■□□□□ 0.87
RTCAO00442 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms