Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SMUG1P1-201ENST00000590640 811 ntBASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 TPRG1LP1-201ENST00000598702 760 ntBASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 C1orf229-201ENST00000623686 2258 ntBASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPA2E9PIF3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPA2E9PIF3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.59■□□□□ 0.73
NPIPA2E9PIF3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NPIPA2E9PIF3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NPIPA2E9PIF3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.58■□□□□ 0.73
NPIPA2E9PIF3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPIPA2E9PIF3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPIPA2E9PIF3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPIPA2E9PIF3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 AC012676.1-201ENST00000574705 1949 ntBASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPA2E9PIF3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms