Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.37■■□□□ 1.65
SNCAIPQ9Y6H5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SNCAIPQ9Y6H5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNCAIPQ9Y6H5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SNCAIPQ9Y6H5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.37■■□□□ 1.65
SNCAIPQ9Y6H5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.37■■□□□ 1.65
SNCAIPQ9Y6H5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SNCAIPQ9Y6H5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 AF201337.1-201ENST00000520239 748 ntBASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNCAIPQ9Y6H5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 AC010141.2-201ENST00000452426 721 ntBASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 AC133552.2-202ENST00000575694 574 ntBASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNCAIPQ9Y6H5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 AC073210.2-201ENST00000430369 194 ntBASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 AC105036.2-201ENST00000569468 176 ntBASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 AC010536.3-201ENST00000620306 533 ntBASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 AC133041.1-202ENST00000642053 222 ntBASIC25.33■■□□□ 1.65
SNCAIPQ9Y6H5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SNCAIPQ9Y6H5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SNCAIPQ9Y6H5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 AC138907.5-202ENST00000569484 235 ntBASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.31■■□□□ 1.64
SNCAIPQ9Y6H5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.3■■□□□ 1.64
SNCAIPQ9Y6H5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
SNCAIPQ9Y6H5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.29■■□□□ 1.64
SNCAIPQ9Y6H5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SNCAIPQ9Y6H5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SNCAIPQ9Y6H5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.29■■□□□ 1.64
SNCAIPQ9Y6H5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SNCAIPQ9Y6H5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.28■■□□□ 1.64
SNCAIPQ9Y6H5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNCAIPQ9Y6H5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNCAIPQ9Y6H5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SNCAIPQ9Y6H5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SNCAIPQ9Y6H5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms