Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 AC004911.1-201ENST00000416316 871 ntBASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 AP005435.1-201ENST00000529293 1178 ntBASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB11Q9Y5F2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
PCDHB11Q9Y5F2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHB11Q9Y5F2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB11Q9Y5F2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB11Q9Y5F2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB11Q9Y5F2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 LINC02228-203ENST00000641970 1355 ntBASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 AC087239.1-201ENST00000622671 572 ntBASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB11Q9Y5F2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 LINC00526-201ENST00000581067 1875 ntBASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 CCDC92B-201ENST00000575506 885 ntBASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 NTF6G-201ENST00000591094 616 ntBASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 ESRRAP2-201ENST00000418437 1549 ntBASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 ECEL1P1-201ENST00000373592 1742 ntBASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB11Q9Y5F2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 AC092437.1-201ENST00000624794 1048 ntBASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB11Q9Y5F2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB11Q9Y5F2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB11Q9Y5F2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms