Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 OXCT2P1-201ENST00000447263 1535 ntBASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 AC133561.1-201ENST00000568600 2415 ntBASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 HLA-L-209ENST00000420110 1011 ntBASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB9Q9Y5E1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 LINC02228-203ENST00000641970 1355 ntBASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB9Q9Y5E1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 AC137767.1-201ENST00000602918 1920 ntBASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB9Q9Y5E1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB9Q9Y5E1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PCDHB9Q9Y5E1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB9Q9Y5E1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 AC079089.2-201ENST00000531211 1277 ntBASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 AC233723.2-201ENST00000623798 2106 ntBASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB9Q9Y5E1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms