Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC105233.4-201ENST00000642045 216 ntBASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPH3AQ9Y2J0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPH3AQ9Y2J0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 OXCT2P1-201ENST00000447263 1535 ntBASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPH3AQ9Y2J0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 AC087742.1-201ENST00000575880 1738 ntBASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 AC012414.1-201ENST00000556676 535 ntBASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPH3AQ9Y2J0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 AC090192.1-201ENST00000517740 490 ntBASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 AL358852.1-201ENST00000623174 1268 ntBASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RPH3AQ9Y2J0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 RARRES2P11-201ENST00000635158 484 ntBASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPH3AQ9Y2J0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 AL354811.1-201ENST00000610286 706 ntBASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPH3AQ9Y2J0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 AL117328.2-201ENST00000624617 1940 ntBASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.67■□□□□ 0.74
RPH3AQ9Y2J0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms