Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 AC139530.1-201ENST00000575312 1977 ntBASIC23.05■■□□□ 1.28
SNX25Q9H3E2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNX25Q9H3E2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNX25Q9H3E2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.04■■□□□ 1.28
SNX25Q9H3E2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNX25Q9H3E2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.04■■□□□ 1.28
SNX25Q9H3E2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNX25Q9H3E2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 AC127496.7-201ENST00000625110 1798 ntBASIC23.02■■□□□ 1.28
SNX25Q9H3E2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 CCDC92B-201ENST00000575506 885 ntBASIC23.02■■□□□ 1.28
SNX25Q9H3E2 TPRG1LP1-201ENST00000598702 760 ntBASIC23.02■■□□□ 1.28
SNX25Q9H3E2 AC068473.5-201ENST00000616428 2072 ntBASIC23.02■■□□□ 1.28
SNX25Q9H3E2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SNX25Q9H3E2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 AP004607.7-201ENST00000527152 1677 ntBASIC23.01■■□□□ 1.27
SNX25Q9H3E2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 AC034268.1-201ENST00000441047 882 ntBASIC23.01■■□□□ 1.27
SNX25Q9H3E2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNX25Q9H3E2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23■■□□□ 1.27
SNX25Q9H3E2 ANKRD20A6P-201ENST00000618763 204 ntBASIC23■■□□□ 1.27
SNX25Q9H3E2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23■■□□□ 1.27
SNX25Q9H3E2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNX25Q9H3E2 AC009237.3-201ENST00000393279 1427 ntBASIC22.99■■□□□ 1.27
SNX25Q9H3E2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 KRT18P14-201ENST00000534205 1250 ntBASIC22.99■■□□□ 1.27
SNX25Q9H3E2 AL034346.1-201ENST00000568244 1277 ntBASIC22.99■■□□□ 1.27
SNX25Q9H3E2 TERF1P2-201ENST00000583350 1212 ntBASIC22.99■■□□□ 1.27
SNX25Q9H3E2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SNX25Q9H3E2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms