Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.086e-7■■■■□ 23.4
CSTF2TQ9H0L4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.142e-6■■■■□ 23.4
CSTF2TQ9H0L4 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.44e-7■■■■□ 23.4
CSTF2TQ9H0L4 FKBP8-210ENST00000599540 1140 ntTSL 212.44□□□□□ -0.426e-7■■■■□ 23.4
CSTF2TQ9H0L4 PPL-206ENST00000592772 3615 ntTSL 511.52□□□□□ -0.576e-7■■■■□ 23.4
CSTF2TQ9H0L4 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC11.02□□□□□ -0.656e-7■■■■□ 23.4
CSTF2TQ9H0L4 TMEM120B-207ENST00000541467 2959 ntTSL 510.71□□□□□ -0.694e-7■■■■□ 23.4
CSTF2TQ9H0L4 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.846e-7■■■■□ 23.4
CSTF2TQ9H0L4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.283e-6■■■■□ 23.4
CSTF2TQ9H0L4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.283e-6■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-210ENST00000497185 108 ntTSL 56.85□□□□□ -1.316e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-201ENST00000336942 601 ntTSL 56.8□□□□□ -1.326e-7■■■■□ 23.4
CSTF2TQ9H0L4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.573e-6■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-209ENST00000480115 394 ntTSL 55.12□□□□□ -1.596e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-211ENST00000546593 244 ntTSL 54.44□□□□□ -1.76e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-208ENST00000452157 5240 ntTSL 1 (best)3.55□□□□□ -1.846e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-206ENST00000440000 219 ntTSL 53.15□□□□□ -1.916e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.936e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.066e-7■■■■□ 23.4
CSTF2TQ9H0L4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.086e-7■■■■□ 23.4
CSTF2TQ9H0L4 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.42e-7■■■■□ 23.4
CSTF2TQ9H0L4 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.412e-7■■■■□ 23.4
CSTF2TQ9H0L4 NEU4-216ENST00000494678 491 ntTSL 417.93■□□□□ 0.467e-11■■■■□ 23.4
CSTF2TQ9H0L4 RNF2-203ENST00000453650 939 ntTSL 58.03□□□□□ -1.121e-6■■■■□ 23.4
CSTF2TQ9H0L4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.58□□□□□ -21e-6■■■■□ 23.4
CSTF2TQ9H0L4 ARHGEF2-217ENST00000497907 764 ntTSL 318.3■□□□□ 0.522e-7■■■■□ 23.3
CSTF2TQ9H0L4 CIC-208ENST00000575839 335 ntTSL 514.97□□□□□ -0.014e-7■■■■□ 23.3
CSTF2TQ9H0L4 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.15□□□□□ -0.464e-7■■■■□ 23.3
CSTF2TQ9H0L4 ZGPAT-207ENST00000468235 594 ntTSL 1 (best)17.32■□□□□ 0.365e-6■■■■□ 23.3
CSTF2TQ9H0L4 BCL2L1-208ENST00000450273 894 ntTSL 317.19■□□□□ 0.344e-12■■■■□ 23.3
CSTF2TQ9H0L4 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.92□□□□□ -0.344e-12■■■■□ 23.3
CSTF2TQ9H0L4 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.374e-12■■■■□ 23.3
CSTF2TQ9H0L4 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.464e-12■■■■□ 23.3
CSTF2TQ9H0L4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.692e-7■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-216ENST00000589956 594 ntTSL 516.75■□□□□ 0.276e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-208ENST00000587654 575 ntTSL 414.98□□□□□ -0.016e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-205ENST00000586775 945 ntTSL 314.4□□□□□ -0.16e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-204ENST00000585886 2362 ntTSL 1 (best)14.38□□□□□ -0.116e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.276e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.576e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-214ENST00000589337 541 ntTSL 411.34□□□□□ -0.596e-9■■■■□ 23.3
CSTF2TQ9H0L4 TNPO2-217ENST00000590781 547 ntTSL 47.76□□□□□ -1.176e-9■■■■□ 23.3
CSTF2TQ9H0L4 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.85e-10■■■■□ 23.3
CSTF2TQ9H0L4 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.095e-10■■■■□ 23.3
CSTF2TQ9H0L4 NCAPG2-210ENST00000491792 581 ntTSL 311.48□□□□□ -0.573e-6■■■■□ 23.3
CSTF2TQ9H0L4 NCAPG2-207ENST00000472591 554 ntTSL 49.96□□□□□ -0.823e-6■■■■□ 23.3
CSTF2TQ9H0L4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.517e-7■■■■□ 23.3
CSTF2TQ9H0L4 ZNF280B-202ENST00000619852 3981 ntTSL 1 (best)7.74□□□□□ -1.177e-7■■■■□ 23.3
CSTF2TQ9H0L4 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)21.44■■□□□ 1.025e-12■■■■□ 23.3
CSTF2TQ9H0L4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.25e-12■■■■□ 23.3
CSTF2TQ9H0L4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.015e-12■■■■□ 23.3
CSTF2TQ9H0L4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.55□□□□□ -0.085e-12■■■■□ 23.3
CSTF2TQ9H0L4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.085e-12■■■■□ 23.3
CSTF2TQ9H0L4 MAGI1-207ENST00000470990 2138 ntTSL 1 (best)7.2□□□□□ -1.265e-12■■■■□ 23.3
CSTF2TQ9H0L4 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)12.94□□□□□ -0.345e-7■■■■□ 23.3
CSTF2TQ9H0L4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.584e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-209ENST00000424419 1276 ntTSL 219.78■□□□□ 0.764e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-214ENST00000453631 650 ntTSL 519.2■□□□□ 0.664e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.35■□□□□ 0.534e-7■■■■□ 23.3
CSTF2TQ9H0L4 TOX3-205ENST00000568436 548 ntTSL 318.33■□□□□ 0.524e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-224ENST00000534399 574 ntTSL 417.43■□□□□ 0.384e-7■■■■□ 23.3
CSTF2TQ9H0L4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.374e-7■■■■□ 23.3
CSTF2TQ9H0L4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.34e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-212ENST00000556615 732 ntTSL 316.29■□□□□ 0.24e-7■■■■□ 23.3
CSTF2TQ9H0L4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.72■□□□□ 0.114e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.15■□□□□ 0.024e-7■■■■□ 23.3
CSTF2TQ9H0L4 WWOX-213ENST00000566662 571 ntTSL 414.49□□□□□ -0.094e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.24e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.264e-7■■■■□ 23.3
CSTF2TQ9H0L4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.284e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-206ENST00000372669 1005 ntTSL 512.38□□□□□ -0.434e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-209ENST00000554930 1377 ntTSL 512.17□□□□□ -0.464e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-213ENST00000556753 775 ntTSL 512.06□□□□□ -0.484e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-216ENST00000467203 943 ntTSL 211.59□□□□□ -0.554e-7■■■■□ 23.3
CSTF2TQ9H0L4 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.654e-7■■■■□ 23.3
CSTF2TQ9H0L4 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC10.99□□□□□ -0.654e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-211ENST00000427410 1379 ntTSL 2 BASIC9.81□□□□□ -0.844e-7■■■■□ 23.3
CSTF2TQ9H0L4 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC9.4□□□□□ -0.94e-7■■■■□ 23.3
CSTF2TQ9H0L4 NFYC-213ENST00000447388 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.934e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.934e-7■■■■□ 23.3
CSTF2TQ9H0L4 MICU3-206ENST00000522235 316 ntTSL 59.07□□□□□ -0.964e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.94□□□□□ -1.144e-7■■■■□ 23.3
CSTF2TQ9H0L4 TOX3-203ENST00000563091 572 ntTSL 47.92□□□□□ -1.144e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.374e-7■■■■□ 23.3
CSTF2TQ9H0L4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.444e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-210ENST00000555870 7434 ntTSL 1 (best)5.91□□□□□ -1.464e-7■■■■□ 23.3
CSTF2TQ9H0L4 HSPB11-205ENST00000488884 463 ntTSL 25.8□□□□□ -1.484e-7■■■■□ 23.3
CSTF2TQ9H0L4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.3□□□□□ -1.564e-7■■■■□ 23.3
CSTF2TQ9H0L4 WWOX-208ENST00000562639 595 ntTSL 45□□□□□ -1.614e-7■■■■□ 23.3
CSTF2TQ9H0L4 RAB7A-207ENST00000491681 552 ntTSL 24.86□□□□□ -1.634e-7■■■■□ 23.3
CSTF2TQ9H0L4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.91■■□□□ 1.263e-8■■■■□ 23.3
CSTF2TQ9H0L4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.313e-7■■■■□ 23.3
CSTF2TQ9H0L4 DBNDD1-207ENST00000623401 2889 nt11.31□□□□□ -0.62e-7■■■■□ 23.3
CSTF2TQ9H0L4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.7■■□□□ 1.063e-7■■■■□ 23.3
CSTF2TQ9H0L4 ELOVL5-204ENST00000465983 696 ntTSL 311.94□□□□□ -0.51e-11■■■■□ 23.2
CSTF2TQ9H0L4 ELOVL5-206ENST00000486973 794 ntTSL 311.9□□□□□ -0.51e-11■■■■□ 23.2
CSTF2TQ9H0L4 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC11.03□□□□□ -0.641e-11■■■■□ 23.2
CSTF2TQ9H0L4 ELOVL5-205ENST00000485336 761 ntTSL 59.12□□□□□ -0.951e-11■■■■□ 23.2
CSTF2TQ9H0L4 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.44□□□□□ -1.221e-11■■■■□ 23.2
CSTF2TQ9H0L4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.291e-11■■■■□ 23.2
Retrieved 100 of 19,151 protein–RNA pairs in 195.8 ms