Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KLHDC3Q9BQ90 ZNRF2P3-201ENST00000424200 374 ntBASIC19.72■□□□□ 0.75
KLHDC3Q9BQ90 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KLHDC3Q9BQ90 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
KLHDC3Q9BQ90 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.72■□□□□ 0.75
KLHDC3Q9BQ90 AC026471.6-201ENST00000622954 1905 ntBASIC19.72■□□□□ 0.75
KLHDC3Q9BQ90 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 AC079834.2-201ENST00000609776 1949 ntBASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 SMUG1P1-201ENST00000590640 811 ntBASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 LINC00565-201ENST00000562710 2331 ntBASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC3Q9BQ90 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 AC092053.2-201ENST00000640557 1818 ntBASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC3Q9BQ90 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 AC087239.1-201ENST00000622671 572 ntBASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC3Q9BQ90 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC3Q9BQ90 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 OR7E47P-201ENST00000546390 1422 ntBASIC19.67■□□□□ 0.74
KLHDC3Q9BQ90 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHDC3Q9BQ90 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms