Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPENQ96T58 AC083880.1-201ENST00000608266 535 ntBASIC19.69■□□□□ 0.74
SPENQ96T58 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SPENQ96T58 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPENQ96T58 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.68■□□□□ 0.74
SPENQ96T58 GCSHP5-201ENST00000443090 522 ntBASIC19.68■□□□□ 0.74
SPENQ96T58 AC079140.4-201ENST00000507448 529 ntBASIC19.68■□□□□ 0.74
SPENQ96T58 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.68■□□□□ 0.74
SPENQ96T58 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.68■□□□□ 0.74
SPENQ96T58 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.68■□□□□ 0.74
SPENQ96T58 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPENQ96T58 AP003733.4-201ENST00000623785 1697 ntBASIC19.68■□□□□ 0.74
SPENQ96T58 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.68■□□□□ 0.74
SPENQ96T58 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPENQ96T58 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPENQ96T58 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPENQ96T58 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPENQ96T58 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.67■□□□□ 0.74
SPENQ96T58 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPENQ96T58 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.67■□□□□ 0.74
SPENQ96T58 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SPENQ96T58 FP325331.1-202ENST00000623531 1380 ntBASIC19.67■□□□□ 0.74
SPENQ96T58 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SPENQ96T58 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SPENQ96T58 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPENQ96T58 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPENQ96T58 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.66■□□□□ 0.74
SPENQ96T58 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SPENQ96T58 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPENQ96T58 POU5F1P3-201ENST00000428824 1078 ntBASIC19.66■□□□□ 0.74
SPENQ96T58 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.66■□□□□ 0.74
SPENQ96T58 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPENQ96T58 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPENQ96T58 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPENQ96T58 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPENQ96T58 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SPENQ96T58 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPENQ96T58 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.65■□□□□ 0.74
SPENQ96T58 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SPENQ96T58 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.65■□□□□ 0.74
SPENQ96T58 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPENQ96T58 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPENQ96T58 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPENQ96T58 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.65■□□□□ 0.74
SPENQ96T58 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPENQ96T58 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.65■□□□□ 0.74
SPENQ96T58 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
SPENQ96T58 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SPENQ96T58 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.65■□□□□ 0.74
SPENQ96T58 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
SPENQ96T58 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.64■□□□□ 0.74
SPENQ96T58 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.64■□□□□ 0.74
SPENQ96T58 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPENQ96T58 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPENQ96T58 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.64■□□□□ 0.74
SPENQ96T58 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPENQ96T58 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPENQ96T58 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPENQ96T58 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPENQ96T58 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.64■□□□□ 0.73
SPENQ96T58 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPENQ96T58 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPENQ96T58 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPENQ96T58 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.64■□□□□ 0.73
SPENQ96T58 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPENQ96T58 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.63■□□□□ 0.73
SPENQ96T58 DUSP5P2-201ENST00000426873 1033 ntBASIC19.63■□□□□ 0.73
SPENQ96T58 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SPENQ96T58 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.63■□□□□ 0.73
SPENQ96T58 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SPENQ96T58 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPENQ96T58 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPENQ96T58 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.63■□□□□ 0.73
SPENQ96T58 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SPENQ96T58 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.63■□□□□ 0.73
SPENQ96T58 MYC-209ENST00000641252 345 ntBASIC19.63■□□□□ 0.73
SPENQ96T58 AC005224.4-201ENST00000583262 1652 ntBASIC19.63■□□□□ 0.73
SPENQ96T58 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SPENQ96T58 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SPENQ96T58 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPENQ96T58 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SPENQ96T58 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SPENQ96T58 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.63■□□□□ 0.73
SPENQ96T58 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPENQ96T58 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPENQ96T58 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPENQ96T58 SLC29A4P1-201ENST00000398760 971 ntBASIC19.62■□□□□ 0.73
SPENQ96T58 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.62■□□□□ 0.73
SPENQ96T58 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.62■□□□□ 0.73
SPENQ96T58 CYP2T1P-201ENST00000432607 1285 ntBASIC19.62■□□□□ 0.73
SPENQ96T58 AC007322.4-201ENST00000509611 723 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms