Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF138Q8WVD3 AC009237.3-201ENST00000393279 1427 ntBASIC19.68■□□□□ 0.74
RNF138Q8WVD3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 AC092053.2-201ENST00000640557 1818 ntBASIC19.68■□□□□ 0.74
RNF138Q8WVD3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF138Q8WVD3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 TERF1P2-201ENST00000583350 1212 ntBASIC19.67■□□□□ 0.74
RNF138Q8WVD3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 AP004607.7-201ENST00000527152 1677 ntBASIC19.67■□□□□ 0.74
RNF138Q8WVD3 AC055733.4-201ENST00000638462 1354 ntBASIC19.67■□□□□ 0.74
RNF138Q8WVD3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF138Q8WVD3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 AC005224.4-201ENST00000583262 1652 ntBASIC19.66■□□□□ 0.74
RNF138Q8WVD3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF138Q8WVD3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 AL117328.2-201ENST00000624617 1940 ntBASIC19.65■□□□□ 0.74
RNF138Q8WVD3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 RARRES2P6-201ENST00000567333 442 ntBASIC19.65■□□□□ 0.74
RNF138Q8WVD3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 LINC02228-203ENST00000641970 1355 ntBASIC19.65■□□□□ 0.74
RNF138Q8WVD3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF138Q8WVD3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF138Q8WVD3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF138Q8WVD3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF138Q8WVD3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF138Q8WVD3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF138Q8WVD3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms