Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AC010141.3-201ENST00000456659 717 ntBASIC26.88■■□□□ 1.89
SMC5Q8IY18 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 OR7E47P-201ENST00000546390 1422 ntBASIC26.88■■□□□ 1.89
SMC5Q8IY18 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMC5Q8IY18 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
SMC5Q8IY18 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMC5Q8IY18 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMC5Q8IY18 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SMC5Q8IY18 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMC5Q8IY18 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMC5Q8IY18 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.87■■□□□ 1.89
SMC5Q8IY18 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
SMC5Q8IY18 AL137060.1-201ENST00000618151 2648 ntBASIC26.86■■□□□ 1.89
SMC5Q8IY18 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMC5Q8IY18 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.86■■□□□ 1.89
SMC5Q8IY18 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMC5Q8IY18 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMC5Q8IY18 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.86■■□□□ 1.89
SMC5Q8IY18 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.86■■□□□ 1.89
SMC5Q8IY18 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMC5Q8IY18 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
SMC5Q8IY18 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.86■■□□□ 1.89
SMC5Q8IY18 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMC5Q8IY18 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMC5Q8IY18 OXCT2P1-201ENST00000447263 1535 ntBASIC26.85■■□□□ 1.89
SMC5Q8IY18 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
SMC5Q8IY18 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMC5Q8IY18 SLC47A1P1-202ENST00000449666 945 ntBASIC26.85■■□□□ 1.89
SMC5Q8IY18 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMC5Q8IY18 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SMC5Q8IY18 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMC5Q8IY18 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SMC5Q8IY18 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.84■■□□□ 1.89
SMC5Q8IY18 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.84■■□□□ 1.89
SMC5Q8IY18 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.84■■□□□ 1.89
SMC5Q8IY18 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
SMC5Q8IY18 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMC5Q8IY18 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.84■■□□□ 1.89
SMC5Q8IY18 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
SMC5Q8IY18 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMC5Q8IY18 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.83■■□□□ 1.89
SMC5Q8IY18 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMC5Q8IY18 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.83■■□□□ 1.89
SMC5Q8IY18 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMC5Q8IY18 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SMC5Q8IY18 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.82■■□□□ 1.88
SMC5Q8IY18 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMC5Q8IY18 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMC5Q8IY18 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMC5Q8IY18 AC087239.1-201ENST00000622671 572 ntBASIC26.82■■□□□ 1.88
SMC5Q8IY18 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMC5Q8IY18 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.82■■□□□ 1.88
SMC5Q8IY18 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SMC5Q8IY18 AP005435.1-201ENST00000529293 1178 ntBASIC26.81■■□□□ 1.88
SMC5Q8IY18 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
SMC5Q8IY18 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMC5Q8IY18 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMC5Q8IY18 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.8■■□□□ 1.88
SMC5Q8IY18 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SMC5Q8IY18 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
SMC5Q8IY18 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMC5Q8IY18 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMC5Q8IY18 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMC5Q8IY18 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.8■■□□□ 1.88
SMC5Q8IY18 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMC5Q8IY18 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMC5Q8IY18 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMC5Q8IY18 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.79■■□□□ 1.88
SMC5Q8IY18 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SMC5Q8IY18 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.79■■□□□ 1.88
SMC5Q8IY18 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.79■■□□□ 1.88
SMC5Q8IY18 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
SMC5Q8IY18 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMC5Q8IY18 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.79■■□□□ 1.88
SMC5Q8IY18 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SMC5Q8IY18 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMC5Q8IY18 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMC5Q8IY18 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms