Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.61■□□□□ 0.89
PPP4R4Q6NUP7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R4Q6NUP7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R4Q6NUP7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PPP4R4Q6NUP7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 AC004448.1-201ENST00000458332 883 ntBASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 MIR6724-1-201ENST00000616420 92 ntBASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 MIR6724-2-201ENST00000616483 92 ntBASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 MIR6724-4-201ENST00000617390 92 ntBASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 MIR6724-3-201ENST00000622482 92 ntBASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R4Q6NUP7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R4Q6NUP7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.58■□□□□ 0.88
PPP4R4Q6NUP7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.58■□□□□ 0.88
PPP4R4Q6NUP7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R4Q6NUP7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.58■□□□□ 0.88
PPP4R4Q6NUP7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R4Q6NUP7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R4Q6NUP7 AC092667.1-201ENST00000434301 2586 ntBASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R4Q6NUP7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R4Q6NUP7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R4Q6NUP7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R4Q6NUP7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms