Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CERKLQ49MI3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CERKLQ49MI3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CERKLQ49MI3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.41■■□□□ 1.66
CERKLQ49MI3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.41■■□□□ 1.66
CERKLQ49MI3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.41■■□□□ 1.66
CERKLQ49MI3 AC055733.4-201ENST00000638462 1354 ntBASIC25.41■■□□□ 1.66
CERKLQ49MI3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CERKLQ49MI3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CERKLQ49MI3 OR7E47P-201ENST00000546390 1422 ntBASIC25.4■■□□□ 1.66
CERKLQ49MI3 KRT18P11-201ENST00000435214 1283 ntBASIC25.4■■□□□ 1.66
CERKLQ49MI3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.4■■□□□ 1.66
CERKLQ49MI3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CERKLQ49MI3 LINC00526-201ENST00000581067 1875 ntBASIC25.4■■□□□ 1.66
CERKLQ49MI3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CERKLQ49MI3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CERKLQ49MI3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CERKLQ49MI3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.39■■□□□ 1.66
CERKLQ49MI3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CERKLQ49MI3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CERKLQ49MI3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CERKLQ49MI3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CERKLQ49MI3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.39■■□□□ 1.66
CERKLQ49MI3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CERKLQ49MI3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CERKLQ49MI3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.39■■□□□ 1.65
CERKLQ49MI3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CERKLQ49MI3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CERKLQ49MI3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CERKLQ49MI3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CERKLQ49MI3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.38■■□□□ 1.65
CERKLQ49MI3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CERKLQ49MI3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CERKLQ49MI3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CERKLQ49MI3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CERKLQ49MI3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.37■■□□□ 1.65
CERKLQ49MI3 AC011767.1-201ENST00000617410 1153 ntBASIC25.37■■□□□ 1.65
CERKLQ49MI3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CERKLQ49MI3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.37■■□□□ 1.65
CERKLQ49MI3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.37■■□□□ 1.65
CERKLQ49MI3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CERKLQ49MI3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CERKLQ49MI3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CERKLQ49MI3 AC026185.1-201ENST00000445748 174 ntBASIC25.36■■□□□ 1.65
CERKLQ49MI3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.36■■□□□ 1.65
CERKLQ49MI3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.36■■□□□ 1.65
CERKLQ49MI3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.36■■□□□ 1.65
CERKLQ49MI3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.36■■□□□ 1.65
CERKLQ49MI3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CERKLQ49MI3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CERKLQ49MI3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CERKLQ49MI3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CERKLQ49MI3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CERKLQ49MI3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CERKLQ49MI3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.35■■□□□ 1.65
CERKLQ49MI3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CERKLQ49MI3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CERKLQ49MI3 HLA-L-209ENST00000420110 1011 ntBASIC25.34■■□□□ 1.65
CERKLQ49MI3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CERKLQ49MI3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.34■■□□□ 1.65
CERKLQ49MI3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.34■■□□□ 1.65
CERKLQ49MI3 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.34■■□□□ 1.65
CERKLQ49MI3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.34■■□□□ 1.65
CERKLQ49MI3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CERKLQ49MI3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CERKLQ49MI3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CERKLQ49MI3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.33■■□□□ 1.65
CERKLQ49MI3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CERKLQ49MI3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CERKLQ49MI3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.33■■□□□ 1.65
CERKLQ49MI3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CERKLQ49MI3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.33■■□□□ 1.65
CERKLQ49MI3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.33■■□□□ 1.65
CERKLQ49MI3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.33■■□□□ 1.65
CERKLQ49MI3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CERKLQ49MI3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CERKLQ49MI3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CERKLQ49MI3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 AC087742.1-201ENST00000575880 1738 ntBASIC25.32■■□□□ 1.64
CERKLQ49MI3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CERKLQ49MI3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
CERKLQ49MI3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.32■■□□□ 1.64
CERKLQ49MI3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.32■■□□□ 1.64
CERKLQ49MI3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.32■■□□□ 1.64
CERKLQ49MI3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CERKLQ49MI3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.32■■□□□ 1.64
CERKLQ49MI3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CERKLQ49MI3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CERKLQ49MI3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms