Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01559Q495D7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01559Q495D7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01559Q495D7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01559Q495D7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01559Q495D7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01559Q495D7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01559Q495D7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01559Q495D7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01559Q495D7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC01559Q495D7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LINC01559Q495D7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01559Q495D7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01559Q495D7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
LINC01559Q495D7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.02■□□□□ 0.16
LINC01559Q495D7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC01559Q495D7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01559Q495D7 Z98882.1-201ENST00000622160 2253 ntBASIC16.02■□□□□ 0.16
LINC01559Q495D7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
LINC01559Q495D7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01559Q495D7 TSPY13P-201ENST00000338964 914 ntBASIC16.02■□□□□ 0.16
LINC01559Q495D7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01559Q495D7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01559Q495D7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01559Q495D7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.02■□□□□ 0.16
LINC01559Q495D7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.02■□□□□ 0.16
LINC01559Q495D7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.02■□□□□ 0.15
LINC01559Q495D7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01559Q495D7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01559Q495D7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01559Q495D7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
LINC01559Q495D7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01559Q495D7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01559Q495D7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01559Q495D7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01559Q495D7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LINC01559Q495D7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01559Q495D7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LINC01559Q495D7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
LINC01559Q495D7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
LINC01559Q495D7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01559Q495D7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01559Q495D7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01559Q495D7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16■□□□□ 0.15
LINC01559Q495D7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16■□□□□ 0.15
LINC01559Q495D7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16■□□□□ 0.15
LINC01559Q495D7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01559Q495D7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01559Q495D7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16■□□□□ 0.15
LINC01559Q495D7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LINC01559Q495D7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01559Q495D7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LINC01559Q495D7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01559Q495D7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01559Q495D7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01559Q495D7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01559Q495D7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01559Q495D7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01559Q495D7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms